Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq10 176 6e-39
>seq10
Length=3900288
Score = 176 bits (194), Expect = 6e-39
Identities = 388/574 (68%), Gaps = 16/574 (3%)
Strand=Plus/Minus
Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 72156
|||||| | || | | |||| | | | ||| | ||||| || |||||||| |||||
Sbjct 3135519 TTCTTTCTTAGGTTCAAGAACTCAAAGACATCGGCGTGCCAGGGCTCCAAGTAGATGGCG 3135460
Query 72157 ATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 72216
| | | ||||| || || || || ||||| || | ||| | || |||||||| | ||
Sbjct 3135459 AAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTATTGAACACA 3135400
Query 72217 CTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG 72276
| | ||| ||||| | ||||| || | |||||||| || | |||||| ||| |
Sbjct 3135399 CGGAGCATGGGAATGAGGCCATTTGAGGTTCCATTGGTTCCTGCAATATAGGATCCCGTT 3135340
Query 72277 GCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334
|||||||| | || ||||| | || || || || || | || ||||| | || |
Sbjct 3135339 GCACGAATGCAGTGAGCATTGA--GGCCAATACCACCAGCTGTCTTGGAGATCATGGCAC 3135282
Query 72335 ATCGTTTTAAC-GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393
| ||| || | || || ||||| ||||| || || || ||| |||||| | | ||
Sbjct 3135281 A-CGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAG 3135223
Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453
||| || | ||| | | ||||||||||| || | || || || || || ||
Sbjct 3135222 CAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATTGAAGAGTGTCGGGGATGCATGAGTG 3135163
Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTG 72509
|| || || | |||| |||||||| ||||| || || || ||||| || | |
Sbjct 3135162 AAGCACTTCTGGGACATGAGATTGTATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGG 3135103
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG-TTAT 72568
||| || || || |||||||| | ||||||||| |||| ||| ||| |||| ||
Sbjct 3135102 ATG----CCGACAGCCACACGCATGATCATATGCTGTGGTCGTTCGGCGA-CTTGCTTGC 3135048
Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628
|| || | || ||| ||||| ||||| || ||||| ||||| || | ||| ||||
Sbjct 3135047 CGATCTTGAGCAGGTATGATTTCTCCAACGTCTTAAAGCCAAAGTATTGGTAGTTGAAGT 3134988
Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662
| || ||||| | || |||| ||||||| |||
Sbjct 3134987 CCCGGTCGTAGACGATGGCCGAGTTGAGTTCATC 3134954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139007047480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |