Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq21 154 2e-32
seq10 154 2e-32
>seq21
Length=3175452
Score = 154 bits (170), Expect = 2e-32
Identities = 379/563 (67%), Gaps = 29/563 (5%)
Strand=Plus/Plus
Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310
||||||| |||||| | |||||||| ||||| || || || |||| ||| | |
Sbjct 2034621 TCATGATGGAGAACATCCACTCGGAGATGTATTCACTCCTCATCGACACCTACGTGAAGG 2034680
Query 125311 ATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369
| || ||| | || |||| | | || | || |||||||| | || | || || ||
Sbjct 2034681 ACCC-CAAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAG 2034739
Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429
||||| | |||| | |||||||| ||| | |||| | | || | |||||
Sbjct 2034740 AAGGCCGACTGGGCTCTGAGGTGGATCTCCGACAAGGAGTCCACCTTTGCTCAACGACTG 2034799
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT-CGGGTAGTTTTGCGGCCATCTTTTG 125488
|| || ||||| ||||| ||||| |||||||||| ||||| | || || || ||||| ||
Sbjct 2034800 GTTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCCGGGTCG-TTCGCTGCAATCTTCTG 2034858
Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548
|||||||| || || ||||| || || || || || | || ||||| ||
Sbjct 2034859 GCTCAAGAGCAAGGGCCTGATGCCGGGCCTTACCTTTTCAAATGAACTCATCTCTCGTGA 2034918
Query 125549 CGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTG 125608
||||||| | ||| || ||||| || ||| | ||||| |||| | ||
Sbjct 2034919 CGAGGGCATGCACACCGATTTTGCATGCCTGCTGCT--GCAAC-ATCT------CAAGCA 2034969
Query 125609 CAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACA 125665
|| | || |||| |||| ||||| ||| | | ||||| || || || ||| |
Sbjct 2034970 CA-AGCC--CGATCCAAAGCTCATCGAGAACGTCATCACCGAGGCAGTCGCTATCGAAAA 2035026
Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725
||||| |||||||| | || || ||| | || | |||||||||| |||||| |||||
Sbjct 2035027 GGAGTTCTTAACCGAAGCGCTCCCTGTCGGTTTGCTGGGCATGAACTCCAAGCTTATGTG 2035086
Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAG--- 125780
||||||| |||||||| || || ||| | ||| ||| || ||| ||||
Sbjct 2035087 TCAGTACATTGAGTTTGTCGCCGACCGTTTGCTG-----CTTGCCATGGGCAACAAGCGC 2035141
Query 125781 ATTTACAACGCCAAGAATCCCTT 125803
|| ||||| || ||||||||||
Sbjct 2035142 ATCTACAATGCTCAGAATCCCTT 2035164
Score = 93.3 bits (102), Expect = 6e-14
Identities = 127/175 (73%), Gaps = 8/175 (5%)
Strand=Plus/Plus
Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081
||| | ||||||||| || |||| ||||||||| | ||||| |||||||||||
Sbjct 2034340 TGGAACATGTACAAACGTGCCGAGGCTAGCTTTTGGACAGCAGAAGAAGTCGATCTGTCA 2034399
Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGA--AAC--TGAGCGAGAGTTTATATC 125137
||||| ||| |||||||| | | | |||||| ||| |||||| | || | ||
Sbjct 2034400 AAGGATCTGCACGATTGGCACAACC----GACTGAACAACGATGAGCGCTACTTCGTCTC 2034455
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTG 125192
||| || | |||||||| || | || || || ||||||||||| |||||| ||
Sbjct 2034456 CCACGTTCTTGCCTTCTTCGCTGCTTCAGACGGTATCGTCAACGAGAATCTGCTG 2034510
>seq10
Length=3900288
Score = 154 bits (170), Expect = 2e-32
Identities = 372/556 (67%), Gaps = 8/556 (1%)
Strand=Plus/Plus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACG 96865
||| || || | | | | |||||| | || |||||| | ||| |||| | | | ||
Sbjct 3135361 AACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCG 3135420
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||| |||||||||||||| || || |||||| | ||| |||||||||| || ||
Sbjct 3135421 CTACGTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCCCTG 3135480
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| || || ||||| || | | | | || ||| ||| || || ||
Sbjct 3135481 GCACGCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAATCCG 3135540
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC-- 97043
|| | |||||||| ||||| | ||| || || ||||||||| |||| ||| |
Sbjct 3135541 GGCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGAGAA 3135600
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
|| || | |||| || | ||||| | | || ||||| ||||| |
Sbjct 3135601 GAACCAGG--AATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTAC 3135658
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC-GTGAGACG 97162
||||| || || ||| ||| | ||||| | |||||||| | || ||||
Sbjct 3135659 GGCGACGACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGAC- 3135717
Query 97163 AGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221
|||| | || | |||| |||||| | |||||| | ||| ||| ||||| || ||||
Sbjct 3135718 AGTCAAGGCCC-AGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTC 3135776
Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281
| ||||| |||||||||||| || || | || |||||||| ||||||| ||||
Sbjct 3135777 CCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACCA 3135836
Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAG 97341
| |||||||||| ||||| || ||||| |||||| | | ||||| ||| || |
Sbjct 3135837 TTCGAAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCCCGGATGAGGTTGCTG 3135896
Query 97342 TTTGCGTTCTGGCATC 97357
| ||| |||||| ||
Sbjct 3135897 TCTGCAATCTGGCTTC 3135912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058986945480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |