Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 158 2e-34 seq15 104 4e-18 >seq9 Length=4529175 Score = 158 bits (174), Expect = 2e-34 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||||| | || || ||||||||||| ||||||||||| || || Sbjct 3376685 GCCAAGAGACATCGCAAGATCT-TGCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 3376627 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||||||||| || ||||||||| |||| | || |||| ||||||| Sbjct 3376626 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCGGCCATGATCTACGAAGAGAC 3376567 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| |||||| | |||| |||| ||| ||| || ||| ||||| Sbjct 3376566 CCGTGGTGTCCTCAAGTCGTTCCTCGAATCCGTCATCCGTGACGCTGTCACCTACACCGA 3376507 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647 ||||| || | ||||| ||||||||| | | ||| Sbjct 3376506 ACACGCGAAGAGAAAGACCGTCACCTCCCTCGGTAT 3376471 >seq15 Length=1330720 Score = 104 bits (114), Expect = 4e-18 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| | | || || |||||||| || ||||||||||| || || Sbjct 201958 GCGAAGAGACATCGCAAGATTT-TGCGCGACAACATCCAGGGTATCACCAAGCCTGCCAT 202016 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||||||| || |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 202017 CAGACGTCTGGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGAC 202076 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || | ||| | |||| |||||| | || |||| |||||| || Sbjct 202077 CCGCGGTGTCCTCAAGACTTTCCTCGAAGGTGTCATCCGAGATGCTGTC 202125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075178970939