Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 >seq12 Length=2267901 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | ||||| || | ||||| |||| | || || | Sbjct 994074 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCAGT 994133 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| || || ||||| || ||||| ||||| Sbjct 994134 GACACCATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAG 994193 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||| || |||||||| |||| | | | | | |||||| ||| Sbjct 994194 CAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACAAC 994253 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||| ||| ||||||| ||||| Sbjct 994254 ATCCAGAAAGAATCCACTCTCCATCTCGTCCT 994285 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || ||||| || | ||||| || | ||||| | || | || || | | Sbjct 993846 ATGCAGATTTTCGTAAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 993905 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 993906 GACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 993965 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || || ||||| ||||| |||| | | | | |||||||| ||| Sbjct 993966 CAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 994025 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| || || | || |||||||| Sbjct 994026 ATCCAGAAAGAGTCAACCCTACACCTGGTCCT 994057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662262384560