Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq10 381 2e-100 >seq10 Length=3900288 Score = 381 bits (422), Expect = 2e-100 Identities = 1134/1728 (66%), Gaps = 32/1728 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || ||||||||| | |||||||| ||| | || ||||| || ||| |||| Sbjct 3135062 GAACGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGACGATATTGAG 3135121 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565 || || || ||||| || || | || | | || ||||| || || | || | Sbjct 3135122 AAGGCCATCGAGACATACAATCTCAT--GTCCCAGAAGTGCTTCACTCATGCATCCCCGA 3135179 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 || | | |||||| ||||| | | || ||| | || || ||||| | | | |||| Sbjct 3135180 CACTCTTCAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGA 3135239 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || |||||||||||||| ||||| || |||| ||||| | || ||||||| Sbjct 3135240 AGGAGGACAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGA 3135299 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCG 363743 || || || ||||| | | || | || || |||||||| | || ||| Sbjct 3135300 CAGCTGGTGGTATTGGCCT--CAATGCTCACTGCATTCGTGCAACGGGATCCTATATTGC 3135357 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || ||| ||| ||||| || |||||||||| |||||||| | || || || Sbjct 3135358 AGGAACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGC 3135417 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | |||||||||||||| || ||||| || || || || || || | ||||| Sbjct 3135418 CCGCTACGTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCC 3135477 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTG-AGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 || |||||| | |||||| |||||| | || | || ||| || || |||||| Sbjct 3135478 CTGGCACGCCGATGTCTTTGAG-TTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAA 3135536 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | || || ||||| |||||||||| | ||| | | ||| || ||| |||| || | Sbjct 3135537 TCCGGGCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCG 3135596 Query 363983 AGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 || | | | || | ||| | || || ||||| || ||| |||||||||| ||||||| Sbjct 3135597 AG--AAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGT 3135654 Query 364041 ATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 | || ||||||| | | |||| ||||| | || ||| |||||| | ||| Sbjct 3135655 GTACGGCGACGACTTCAAGGAGCTC--TACGAGAGATACGAAAAGGAGGGCCGTGGCCGT 3135712 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 ||||| | || |||||||| |||| ||||||| | || | |||| |||||| || Sbjct 3135713 CAGACAGTCAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGT 3135772 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || ||||| ||| | ||||| ||| | |||||| | ||| ||||||| || || | || Sbjct 3135773 ACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGA 3135832 Query 364219 ACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || |||| | || ||| || || ||||||||| | || ||||| || || || ||| Sbjct 3135833 ACCATTC-GAAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCCCGGATGAGGT 3135891 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAG---ATGGTAC 364331 ||| || || || || || || | || ||||| | ||||| ||| ||| Sbjct 3135892 TGCTGTCTGCAATCTGGCTTCTCTGGCTCTTCCAACCTTTGTCGACCAAGGCCGTGGCGA 3135951 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 | |||| | | || | || || ||| | | || ||||| | ||||| | Sbjct 3135952 GTATGACTTCGGCCGCCTCCACGAGGTCACCCAAGTGGTGACCCGCAATTTGAACAAGAT 3136011 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCC 364451 ||||||| || || ||||| | || || ||| || || ||||| || ||||| Sbjct 3136012 CATCGACATCAACTACTATCCTGTGCCAGAGGCCAAGAAGAGCAACATGCGACACCGCCC 3136071 Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGA 364511 |||||||||||||| || || || ||||| | || | || || | ||||| Sbjct 3136072 TATTGGTCTTGGTGTTCAAGGTCTTGCTGATGCATTCCTTGCCCTGCGTCTGCCCTTTGA 3136131 Query 364512 TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAAT 364571 || || || ||||| || || | |||||||||| || || || || || | Sbjct 3136132 CTCTCCGGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATTTACCACGCTGCTCT 3136191 Query 364572 GACTGCTTCGTGTGATTTGGCAA-AAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 |||||||| || || | |||| | ||| || || || || |||||| || Sbjct 3136192 CACTGCTTCATGCGAGCTTGCAAGGGAGCAA-GGCGCCTATGAAACATACGAGGGGAGCC 3136250 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | || || || | |||| | || | |||||||| || || || | || ||| Sbjct 3136251 CAGTCTCCCAAGGCACTCTCCAATACGACATGTGGAATGTTACTCCTTCCGACCTGTGGG 3136310 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAG 364750 ||||||| | || || || || || | || ||||||||| || || | Sbjct 3136311 ACTGGGACTCACTGAAGGCCGACATTGCCAAATACGGGGTTCGCAACTCTCTGCTTGTTG 3136370 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | |||||||| || || || || | ||||| || || |||||||| ||||| || || | Sbjct 3136371 CTCCCATGCCTACCGCGTCAACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCAT 3136430 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 ||| ||| | ||||| ||||| || || | || || |||| ||| || || | Sbjct 3136431 ATACTTCCAACATCTATTCCCGCCGTGTCCTGGCTGGTGAGTTTCAGGTCGTCAACCCAT 3136490 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || | ||||| || ||||| || || ||| |||| |||||||||| ||| | Sbjct 3136491 GGCTGTTGAAGGACCTGGTCGACCTTGGCCTCTGGTCAGACAACATGAAGAACCGTATTA 3136550 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 |||||| | |||||| || |||||||| || | || | || | ||| | | | Sbjct 3136551 TCGCCGATGGTGGTTCAGTTCAGAACATCCCCAACATCCCTGCTGACATCAAGGCGTTGT 3136610 Query 364991 ACAAAACCGTATGGGAAAT--TTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 |||| || || |||||||| || | || || || | | |||||||| || || || Sbjct 3136611 ACAAGACTGTCTGGGAAATCAGTCAA--CGGACAATCCTCCAAATGGCGGCAGACCGAGG 3136668 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108 ||| || ||| ||| ||| || | ||| | | ||| | || ||| | ||| Sbjct 3136669 TGCCTTCATCGACCAGTCCCAATCTCTGAACATCCACTTGAAGGAACCGACCATGGGCAA 3136728 Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | ||||||||||| || || ||||| ||||| ||||| || Sbjct 3136729 AATCACATCCATGCACTTTGCTGGCTGGAAGATGGGTCTCAAGACCGG 3136776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353215917986