Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq10 149 6e-31 seq12 131 2e-25 seq9 102 8e-17 >seq10 Length=3900288 Score = 149 bits (164), Expect = 6e-31 Identities = 984/1555 (63%), Gaps = 35/1555 (2%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||||||||| || |||| ||||| || |||| | ||| || || | || Sbjct 3136485 TTGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTTGGAAGTATATGGC 3136426 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| | ||||| ||||| || || || | ||| | ||||| |||||| || || Sbjct 3136425 TCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGCATGGGAGCAACA 3136366 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | |||| || ||||| |||| || | |||| ||||| Sbjct 3136365 AGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGCCTTCAGTGAGTCCCAGTCCCAC 3136306 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | || | || | |||||||||||| || | | |||| | | | | ||||| Sbjct 3136305 AGGTCGGAAGGAGTAACATTCCACATGTCGTATTGGAGAGTGCCTTGGGAGACTGGGCTC 3136246 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | | | || || | | | || |||||||| || |||| Sbjct 3136245 CCCTCGTATG--TTTCATAGGCGCCTTGCTCCCTTGCAAGCTCGCATGAAGCAGTGAGAG 3136188 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | || ||||| ||||| || || ||||||| | || || || Sbjct 3136187 CAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCTCCGGAGAGTCAA 3136128 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||| ||||| | || ||||| || || || || | || | || || || | Sbjct 3136127 AGGGCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTTGAACACCAAGACCAATAGGGC 3136068 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534 | ||| |||||||||| || | ||| || | | |||||| || |||||| || Sbjct 3136067 GGTGTCGCATGTTGCTCTTCTTGGCC-TCTGGCACAGGATAGTAGTTGATGTCGATGATC 3136009 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || ||||| || || || || | || | | | | | |||||| | | Sbjct 3136008 TTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGGAGGCGGCCGAAGTCATA-CTC 3135950 Query 145595 GCCTC-GTCAACGACCACACAGCTATTGACG-GCGATCGACGCCAAATTACAAACTGCCG 145652 ||| | | | | | ||| || | | || | || | || |||| ||| || || || Sbjct 3135949 GCCACGGCCTTGGTCGACAAAGGT-TGGAAGAGCCAGAGAAGCCAGATTGCAGACAGCAA 3135891 Query 145653 TCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712 ||| || | | | |||| | || ||||||| ||| | |||| | | ||||||| Sbjct 3135890 CCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAGCTTCGAATGGTTC 3135831 Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772 ||| || | ||| || || ||||||||||| || ||||||||||||||||| || | Sbjct 3135830 CCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTAC 3135771 Query 145773 CAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCT 145832 | ||||| ||| | ||| | ||| | || | ||| || || ||| Sbjct 3135770 CCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTTGACTGTCTGAC 3135711 Query 145833 GGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAAT 145892 || |||||||| | ||||||| || ||||||||||| || || ||||| || Sbjct 3135710 GGCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCTTGAAGTCGTCGCCGTACACAT 3135651 Query 145893 CGGACAGGCCGGGACACTTGTTG-GGACACATCAGCGACCATACGCCGTTGGCGTTGACG 145951 ||| || || ||| ||| || || || | || | |||| | ||| | ||| Sbjct 3135650 CGGCAAGACCTGGA-GCTTCATGAGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGACA 3135592 Query 145952 CGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCC 146011 |||||||| ||||| || || ||||| ||| || | |||||| || || | ||| Sbjct 3135591 CGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGTCACGAGCCCGGATTTCC 3135532 Query 146012 TCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTC 146070 || || ||| | ||| | ||| || | | ||| || |||||||| || || Sbjct 3135531 TCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTC-AAAGACATCGGCGTGCCAGGGCTC 3135473 Query 146071 AATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCAT 146127 | |||| ||||| || || ||| ||||| |||||||| |||| || || | Sbjct 3135472 CAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGGGCCGT 3135413 Query 146128 GTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCT---GGCTAC-GCCGTTCGTAGAGT 146183 ||| || || || || | |||||| || ||| | || | | |||| | | | Sbjct 3135412 GTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCATTGGTTCCTGCAAT 3135353 Query 146184 TTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GCCGTAC 146242 || | | ||| | | || | ||| ||| |||| | ||| | ||| || || || | Sbjct 3135352 ATA---GGATCCCGTTGCA-CGAATGCAGTGAGCATTGAGGCCAATACCACCAGCTGT-C 3135298 Query 146243 TTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTT 146299 ||||| || ||| || ||| ||| || |||||||| || || ||||| || ||| Sbjct 3135297 TTGGAGATCATGGCACACGTC-TTGAGAGTGTCGTAGATACCCTCGATGCTGTCCTCCTT 3135239 Query 146300 CGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAAC 146359 | ||| ||| || ||||| ||| | | ||| | | ||||| ||||| ||| | Sbjct 3135238 C--ATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATTGAAGAGT 3135181 Query 146360 GTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTC 146418 |||||| || || || || || || | || ||| | || || ||||| || | Sbjct 3135180 GTCGGGGATGCATGAGTGAAGCACTTCT-GGGACATGAGATTGTATGTCTCGATGGCCTT 3135122 Query 146419 TTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTC 146478 | ||| |||||||| || ||||| | ||| || ||||||| ||| || || || || || Sbjct 3135121 CTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCATATGCTGTGGTCGTTC 3135062 Query 146479 CGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAAAAA 146538 || ||||| ||| | ||||| | || || ||||||| || || | || || | Sbjct 3135061 GGCGACTTGCTTGCCGATCTTGAGCAGGTATGATTTCTCCAACGTCTTAAAGCCAAAGTA 3135002 Query 146539 TTTGTACGTATAGTCTACGGCATGGTCGATAGCTTCGTTGATTTCGTCGCCATGT 146593 || ||| | |||| | | | | |||| || ||||| ||| ||| | ||| Sbjct 3135001 TTGGTAGTTGAAGTCCCGGTCGTAGACGATGGCCGAGTTGAGTTCATCGGCGTGT 3134947 >seq12 Length=2267901 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | |||| ||| ||||| || || |||||||| |||||| Sbjct 994072 CCGCCACGAAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTC 994013 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||| || || ||| |||| | |||||||| || ||||| Sbjct 994012 AGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGA 993953 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || ||| ||||||||| Sbjct 993952 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACC 993893 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || ||||||||||||||||| Sbjct 993892 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846 >seq9 Length=4529175 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || || ||||| ||||||| || || ||||| || |||||||| ||| ||| Sbjct 3501055 CCTTCTGGATATTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGTTGCTTGCCCGCGAAGA 3500996 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || |||||||||||||| ||||| ||||| ||||| ||| || |||| | | Sbjct 3500995 TCAACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGT 3500936 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||| |||| |||| ||| | ||| || || || || || || |||| Sbjct 3500935 CGATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 3500876 Query 131225 A 131225 | Sbjct 3500875 A 3500875 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | |||||| || | || | |||||| ||||| || |||||||| ||| Sbjct 1601667 CCGCCGCGGAGACGCAGGACCAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAA 1601726 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || || |||||||| ||| |||| | ||||||||||| |||||| Sbjct 1601727 AGCGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 1601786 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 1601787 ATCCCTTCCTTGTC 1601800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012664296320