Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq9 100 6e-16 >seq9 Length=4529175 Score = 100 bits (110), Expect = 6e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| | ||| | | |||| |||||||| || ||||||||||| | Sbjct 2802832 CCAACTTCGGTCTTGACGCTGAGCTGATCTCTCATTCTCGCATGCGAGGTCTTTCTGGCG 2802891 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| |||| ||| || || || ||||| | ||||||| |||| ||| Sbjct 2802892 GCCAGCGTGTCAAGGTTGTGCTCGCTGCCTGCACT-TGGCAGCGCCCTCACTTGATTGTT 2802950 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || ||||||||||| ||||| || || ||||| Sbjct 2802951 CTGGACGAGCCTACGAACTACCTCGATCGCGA 2802982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836497109343