Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq12 145 6e-30 >seq12 Length=2267901 Score = 145 bits (160), Expect = 6e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | |||| || || ||||| || |||||||| ||| Sbjct 994075 ATACCGCCACGAAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCG 994016 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||| || || |||||||||||| ||||||| ||||| || || ||| Sbjct 994015 CTCAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGA 993956 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || | | || | ||||||| |||| ||| Sbjct 993955 GGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCG 993896 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| ||||| || ||||| ||||||||||| Sbjct 993895 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| | ||| | ||| | ||| | || ||||| || || ||||||||||| Sbjct 994531 ATACCACCACGCAATCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCT 994472 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||||| || ||||||||| |||| | || ||||||||||| Sbjct 994471 GAGAGTGTACGGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGT 994412 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || |||||| || | | |||| ||||| | ||||| Sbjct 994411 GGGATGCCCTCCTTATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCA 994352 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||| |||| ||||| ||||| || ||||| Sbjct 994351 ACCTCGAGTGTGATCGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || |||||||| || |||||||| ||| Sbjct 994303 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCG 994244 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| || ||||| || || || |||||||||| || || || ||| Sbjct 994243 GAAAGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGA 994184 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || |||||| || | | || | |||||| |||| || Sbjct 994183 GGAATGCCTTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCA 994124 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| ||||| || || || || || ||||| Sbjct 994123 ACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134282231076