Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 248 2e-60 seq21 172 1e-37 >seq10 Length=3900288 Score = 248 bits (274), Expect = 2e-60 Identities = 1087/1688 (64%), Gaps = 83/1688 (5%) Strand=Plus/Minus Query 243760 GGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAG 243819 ||| ||| |||| | ||||||||||||||||||||||| || | |||| | | Sbjct 3136804 GGCAGCCATGGTGCGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCAGCAAA 3136745 Query 243820 GTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG--TCCTCGCACAGAAAGAGG 243877 |||||||| || | || ||| ||||| |||| | | || | Sbjct 3136744 GTGCATGGATGTGATTTTGCCCAT-----------GGTCGGTTCCTTCAAGTG---GATG 3136699 Query 243878 TTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG-GTC 243936 || || || ||| |||||||| ||||| | || ||||| ||||| || || ||| Sbjct 3136698 TTCAGAGATTGGGACTGGTCGATGAAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTC 3136639 Query 243937 CTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 | | ||| ||| || || || |||||||| | | ||||| || | |||| Sbjct 3136638 CGT-TGACTGATTTCCCAGACA--GTCTTGTACAACGCCTTGATGTCAGCAGGGATGTTG 3136582 Query 243995 TCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 ||||||||| || || || | | |||| | || | |||||| || ||| Sbjct 3136581 GGGATGTTCTGAACTGAACCACCATCGGCGATAATACGGTTCTTCATGTTGTCTGACCAG 3136522 Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGAC 244114 ||||| | | |||| ||| | ||| ||| || ||||||||||| || | | Sbjct 3136521 AGGCCAAGGTCGACCAGGTCCTTCAACAGCCATGGGTTGACGACCTGAAACTCACCAGCC 3136462 Query 244115 AGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGT 244174 || || ||||| |||| |||| | ||||| | || || ||||||| || Sbjct 3136461 AGGACACGGCGGGAATAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGA 3136402 Query 244175 ATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGC 244234 ||||||| || ||| || |||||||| | || |||||| ||| | || |||| Sbjct 3136401 ATCTGCGAGGTTGACGCGGTAGGCATGGGAGCAACAAGCAGAGAGTTGCGAACCCCGTA- 3136343 Query 244235 CTCTGG--ATG-CGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291 | ||| ||| ||| | | || || ||||||||||| | | || ||| | | | Sbjct 3136342 -TTTGGCAATGTCGGCCT-TCAGTGAGTCCCAGTCCCACAGGTCGGA-AGGAG-TAACAT 3136287 Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT-GACGGGGCTGCCCTCGTAGGT 244350 | ||||||||| | || || || ||||| ||| ||||| |||||||| || Sbjct 3136286 T-------CCACATGTCGTATTGGAG-AGTGCCTTGGGAGACTGGGCTCCCCTCGTATGT 3136235 Query 244351 CGGGTAGGGACCGT-CGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409 |||| || | | | || | | |||| || | ||| || |||| ||| | Sbjct 3136234 TTCATAGGCGCCTTGCTCCCTTG-CAAGCTCGCATGAAGCAGTGAGAGCAGCGTGGTAAA 3136176 Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG-GTGAAGGGGATGCC- 244467 ||||||| |||||| |||| | | || |||| ||| || || || ||| | | Sbjct 3136175 TGGTCTCAAAGATCTGGATGTTGAGTTGTCGAGCCT--CCGGAGAGTCAAAGGGCAGACG 3136118 Query 244468 CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527 || | ||| | || || || || || || || | || || || | ||||||| | Sbjct 3136117 CAGGGCAAGGAATGCATCAGCAAGACCTTGAACACCAAGACCAATAGGGCGGTGTCGCAT 3136058 Query 244528 GTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTT 244587 |||| | |||| || ||||| || || ||||| |||||| | |||||| | || Sbjct 3136057 GTTGCTCTTCTTGGCCTCTGGCACAGGATAGTAGTTGATGTCGATGATCTTGTTCAAATT 3135998 Query 244588 GCGGGTGATCATGCGGACGACGTCGGCCAG-CAGCTGAAAGTCGTACTCGTAGGGATCCT 244646 |||||| | || || ||| ||| || | || ||| ||| |||||| || Sbjct 3135997 GCGGGTCACCACTTGGGTGACCTCGTGGAGGCGGCCGAA-GTCATACTCG-------CCA 3135946 Query 244647 CGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGACGGC 244704 |||| |||| ||||| |||| || || | ||||| |||||||| || Sbjct 3135945 CGGCCTTGGTCG-----ACAAAG--GTTGGAAGAGCCAGAGAAGCCAGATTGCAGACAGC 3135893 Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764 ||||| |||| | ||||||| |||||||||||||||||| || || ||||| Sbjct 3135892 AACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAGCTTCGAATGGT 3135833 Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824 |||| || || || ||| ||| ||||||||| ||||||||||||||| |||| Sbjct 3135832 TCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGT 3135773 Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCT 244884 || ||||| |||||| | |||| | | ||| || | | |||||||| ||| Sbjct 3135772 ACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTTGACTGTCTG 3135713 Query 244885 GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGAC 244944 || | |||||| ||||| | ||| || ||| ||| ||| ||| | || Sbjct 3135712 ACGGCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCTTGAAGTCGTCGCCGTACAC 3135653 Query 244945 CTCGTCTAGGCC-GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGA 245003 ||| | || || || || | | ||||| | ||| |||| || | | || || Sbjct 3135652 ATCGGCAAGACCTGGAGCTTCATG-AGGGCAGAAAAGAGTCCATTCCTGGTTCTTCTCGA 3135594 Query 245004 CCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCT 245063 | | || |||||| | |||||| |||| | || | ||| | ||| | | || | Sbjct 3135593 CACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGTCACGAGCCCGGATTT 3135534 Query 245064 CGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCT 245123 | ||| ||| |||||| || || | ||| || |||||||| ||| |||||||||||| Sbjct 3135533 CCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGACATCGGCGTGCCAGGGCT 3135474 Query 245124 CCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGA 245183 ||| ||||| |||| ||||| || ||||| ||||| |||||||| | | | || Sbjct 3135473 CCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGA----CGTAGCGG 3135418 Query 245184 G-CGCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCC 245239 | || | ||||| | || || | || | | ||| || ||| || ||||| || Sbjct 3135417 GCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCATTGGTTCCT 3135358 Query 245240 TTGATGTAGGCGCCC-TTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGG 245294 || |||| ||| |||| | | ||| | || ||| ||| | || || | Sbjct 3135357 GCAATATAGGATCCCGTTGCAC----GAATGCAG-TGAGCATTGAGGCCAATACCACCAG 3135303 Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354 | ||||||||| | ||| || |||||| ||||| || ||||| ||||||||| Sbjct 3135302 CTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCCT 3135243 Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414 |||||||| || || ||||||||||| |||||||||| || | | || ||||| | Sbjct 3135242 CCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATTGAAGA 3135183 Query 245415 GAGTGGGG 245422 | || ||| Sbjct 3135182 GTGTCGGG 3135175 >seq21 Length=3175452 Score = 172 bits (190), Expect = 1e-37 Identities = 319/463 (69%), Gaps = 25/463 (5%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||| | || || || || || ||||||||| |||||||| |||||||| || | Sbjct 2034701 CTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGG 2034760 Query 42669 TGGATC---GA----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 |||||| || |||||| || || | | | ||||| || || | || Sbjct 2034761 TGGATCTCCGACAAGGAGTCC-------ACCTTTGCTCAACGACTGGTTGCTTTCGCAGC 2034813 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 ||||||||| |||||||| || || | ||||| | ||||||||||||||| |||| Sbjct 2034814 CGTCGAGGGTATCTTCTTTTCCGGGTCGTTCGCTGCAATCTTCTGGCTCAAGAGCAAGGG 2034873 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 |||||| || || ||||| || || ||||||||| | |||||||| |||| | Sbjct 2034874 CCTGATGCCGGGCCTTACCTTTTCAAATGAACTCATCTCTCGTGACGAGGGCATGCACAC 2034933 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCC--TCGAAGGAGCGG 42899 || ||||| ||||| ||| | | || |||| |||||||||| || || ||| Sbjct 2034934 CGATTTTGCATGCCTGCTGCT---GCAACATCTCAAGCACAAGCCCGATCCAA--AGCTC 2034988 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959 || | | ||||||| ||||| || | ||||| ||||||||| | || | |||| Sbjct 2034989 ATCGAGAACGTCATCACCGAGGCAGTCGCTATCGAAAAGGAGTTCTTAACCGAAGCGCTC 2035048 Query 42960 CCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 || || || | ||||||||| | | || ||||| ||||||| ||| |||||| Sbjct 2035049 CCTGTCGGTTTGCTGGGCATGAACTCCAAGCTTATGTGTCAGTACATTGAGTTTGTCGCC 2035108 Query 43020 GACCATCTCCTG--TGCCAGATGGGTCTCAGCCGCCTCTACAA 43060 |||| | | ||| |||| ||||| || ||| ||||||| Sbjct 2035109 GACCGTTTGCTGCTTGCC--ATGGGCAACAAGCGCATCTACAA 2035149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338928502480