Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 2e-23
seq9 111 4e-19
>seq12
Length=2267901
Score = 125 bits (138), Expect = 2e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| || |||||||| | ||| ||| || ||||| || || || | |
Sbjct 994528 CCACCACGCAATCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 994469
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | || || || |||||||||| || ||||| ||||
Sbjct 994468 AGTGTACGGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGG 994409
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || |||||||| || |||| || ||||| || || | || ||||| ||
Sbjct 994408 ATGCCCTCCTTATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACC 994349
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||||||||| || |||| || ||||| || || |||||
Sbjct 994348 TCGAGTGTGATCGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
>seq9
Length=4529175
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| |||||||| |||||| ||||| || || || || | ||| || || |||||||||
Sbjct 3501053 TTCTGGATATTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGTTGCTTGCCCGCGAAGATC 3500994
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| ||||| || |||||| ||||| || |||||||| || | ||| || || ||
Sbjct 3500993 AACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 3500934
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| ||||| || ||||| ||||| ||||| || || || |||||||||||
Sbjct 3500933 ATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 3500875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654052370594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |