Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq10 266 3e-66 >seq10 Length=3900288 Score = 266 bits (294), Expect = 3e-66 Identities = 621/924 (67%), Gaps = 16/924 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGG 93773 || ||| | ||||||| ||| || || ||||||| || ||||| |||||||| || | Sbjct 3134993 AACTACCAATACTTTGGCTTTAAGACGTTGGAGAAATCATACCTGCTCAAGATCGGCAAG 3135052 Query 93774 CAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCA 93833 || | | |||| ||||| || || || | ||||| || || |||| || |||||| | Sbjct 3135053 CAAG-TCGCCGAACGACCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGA 3135111 Query 93834 CGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892 ||| || ||| | | | | | || |||| | ||| | | || |||| Sbjct 3135112 CGATATTGAGAAGGCCATCGAGACATACAATCTCATGTCCCAGAAGTGCTTCACTCATG- 3135170 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | ||||||| || ||||| ||||| || || ||| ||| | || || || ||| ||| Sbjct 3135171 CATCCCCGACACTCTTCAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGA 3135230 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | |||| ||| |||| || || | ||||| |||||| ||||| | Sbjct 3135231 TCGAC-ATGAAGGAGGACAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATG 3135289 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || || || ||| || ||| | | ||||| | ||| ||| Sbjct 3135290 ATCTCCAAGACAGCTGGTGGTATTGGCCTCAATGCTCACTGCATTCGTGCAACGGGATCC 3135349 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || || |||||||| ||||| || |||||| | || |||||||| || ||||| Sbjct 3135350 TATATTGCAGGAACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAAT 3135409 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| |||| |||||||| |||||||| || | | | ||| ||||||| |||| Sbjct 3135410 AACACGGCCCGCTACGTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTAC 3135469 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | |||||||||||||| || || | ||| | |||| |||||||||||||||| Sbjct 3135470 TTGGAGCCCTGGCACGCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAG 3135529 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||| | |||| | ||| | ||||| || | ||| || ||| | || ||| Sbjct 3135530 GA---GGAAATCCGGGCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATG 3135586 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 | || |||||||| ||| | |||| |||||| || || ||||| ||| || || Sbjct 3135587 GAGCGTGTCGAGAAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTT 3135646 Query 94369 TCCGACGTTTGTGGATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCA 94426 |||| || | || || || || || || | || | | |||||| | ||||| Sbjct 3135647 GCCGATGTGTACGG--CGACGACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCC 3135704 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 | | | || | | || |||||||||| || ||| | || | ||| | Sbjct 3135705 GTGGCCGTCAGACAGTCAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTG 3135764 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||||||||| |||||||| | | |||||| | |||| ||| ||||||| || Sbjct 3135765 AGACGGGTACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGA 3135824 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 || | || || ||||| ||||| |||||||||||||||||||| || | |||| Sbjct 3135825 ACTTGGGAACCATTCGAAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCCCGG 3135884 Query 94607 ACGAGATTGCTGTGTGTAACCTGG 94630 | ||| ||||||| || || |||| Sbjct 3135885 ATGAGGTTGCTGTCTGCAATCTGG 3135908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723057767080