Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10 217 2e-51 seq21 102 1e-16 >seq10 Length=3900288 Score = 217 bits (240), Expect = 2e-51 Identities = 1105/1732 (64%), Gaps = 37/1732 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| ||| ||||||| || | ||||| || | Sbjct 3136791 CGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCAGCAAAGTGCATGGATGTG 3136732 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGG---TTCATACTTTGGGATTGATCGATG 115674 | ||| | || || |||| | ||| || |||| | |||||| || |||||| Sbjct 3136731 ATTTTGCCCATGGTCGG---TTCCTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGATG 3136675 Query 115675 AAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGT 115733 ||| || || || |||||||| | | | ||| | || ||||||||| ||||| Sbjct 3136674 AAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACT-GATTTCCCAGACAGT 3136616 Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793 |||| | ||| || ||| | ||||| | ||| || || | || ||||| | Sbjct 3136615 CTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACCACCATC 3136556 Query 115794 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853 || || | | |||||| | | ||||||||| |||| | || |||| || Sbjct 3136555 GGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCAA 3136496 Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGT 115913 || ||||| || ||||||||| || ||| || | ||||||||||| Sbjct 3136495 CAGCCATGGGTTGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTTGGA 3136436 Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 115973 || |||||||||||||| || ||||| || | || || | || || || || ||||| Sbjct 3136435 AGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGCAT 3136376 Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033 ||| || | || || |||||| | || |||| |||| || | ||| Sbjct 3136375 GGGAGCAACAAGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGCCTTCAGTGAGTC 3136316 Query 116034 CCAGTCGTA---GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 |||||| | || | || | | |||||| || | ||||| | ||||| Sbjct 3136315 CCAGTCCCACAGGTCGGAAGGAGTAACA---TTCCACATGTCGTATTGGAGAGTGCCTTG 3136259 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 116150 ||| |||| ||||| |||| ||||| | ||| | || || | ||| | Sbjct 3136258 GGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTGCTCCCTTGCAAGCTCGCATGA 3136199 Query 116151 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCT 116209 || ||| || ||||| || || |||||||| || | || | ||| | | ||| Sbjct 3136198 AGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGTCGAG-CCT 3136140 Query 116210 CGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 116269 | || ||||| | ||||| || ||| |||| || |||||||| ||||| | Sbjct 3136139 CCGGAGAGTCAAAGGGCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTTGAACACCAA 3136080 Query 116270 GGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC-CACGGGATAAAAATTC 116328 | ||||| ||||| |||| ||| || ||| || ||| ||| ||||| | || Sbjct 3136079 GACCAATAGGGCGGTGTCGCATGTTGCTCTTCTTGGCC-TCTGGCACAGGATAGTAGTTG 3136021 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 | ||||| | | | || | ||| ||| || || | |||| || || || || Sbjct 3136020 ATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGGAGGCGGCCG 3135961 Query 116389 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | ||| | || | ||| | |||| | | ||||| || | || |||||||| Sbjct 3135960 AAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAAGCCAGATTG 3135901 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 || |||| ||||||| | |||||||| | ||| || || || | ||| || || Sbjct 3135900 CAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAGCTT 3135841 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 |||||| ||||||||||| || || ||| |||| || ||||||||||||||||| Sbjct 3135840 CGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATG 3135781 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGG 116627 || || || |||||||| || |||| || || || || | ||| | | || | | || | Sbjct 3135780 TAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCCTTG 3135721 Query 116628 CACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 || | || || | | || ||||||| ||||| | |||||| ||| || || Sbjct 3135720 -ACTGTCTGACG--GCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCTTGAAGTCG 3135664 Query 116686 TCACC-CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACC 116744 || || ||| | || | || ||||| || | || || ||||| |||| ||||| Sbjct 3135663 TCGCCGTACA-CATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTCCATTCCTG 3135605 Query 116745 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 116804 || ||| || |||| |||||| | ||| || |||| | ||| |||| | || || Sbjct 3135604 GTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGTCACG 3135545 Query 116805 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864 | || ||| || | || || || | | | ||| || || | || ||| || Sbjct 3135544 AGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGACATCGGC 3135485 Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCC--TTGC-GACGACCAGCCTGGTTTAC 116921 |||||| || |||| ||| | |||| | ||| | || | || |||||| || Sbjct 3135484 GTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGAC 3135425 Query 116922 ATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATT 116981 || | ||||| || || || || ||||| ||||||| |||| || ||||| Sbjct 3135424 GTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCATT 3135365 Query 116982 TGTCCCCCGAATACGAGA-CTTGTTGGCTCTGA--CATCGTGGATGTGCATACCAATACC 117038 || || |||| || | ||| || | | || | | || || | |||||||| Sbjct 3135364 GGTTCCTGCAATATAGGATCCCGTT-GCACGAATGCAGTGAGCAT-TG-AGGCCAATACC 3135308 Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098 || || ||| ||||| || ||| | ||||| || ||||||| || ||||| Sbjct 3135307 ACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCCTCGATGCT 3135248 Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 117158 ||| |||| | |||| | ||||||| || | || ||| ||| || || || || Sbjct 3135247 GTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATT 3135188 Query 117159 GAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTATCGTAGGTCTCCA 117217 |||||| || || | || || |||| || | |||||||| || ||| ||||| | Sbjct 3135187 GAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC-TGGGACATGAGATTGTATGTCTCGA 3135129 Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269 | | ||| || || ||||| || |||| | || ||||| | ||| Sbjct 3135128 TGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCAT 3135077 >seq21 Length=3175452 Score = 102 bits (112), Expect = 1e-16 Identities = 202/296 (68%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||||||||| |||||||||||||| || ||| || || Sbjct 2034942 GCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTCATTTGAAAAGGTAAGGCCC 2034883 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || ||| |||| | |||||| || ||| || || || || |||||||| Sbjct 2034882 GGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAGATA 2034823 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA- 127696 ||||| || ||||| |||| || || | ||||||| ||||| |||| | Sbjct 2034822 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGG---TGGACTCCTTGTCGGAG 2034766 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | |||| ||| ||||| | ||||| || ||| || |||| ||| | ||| || || Sbjct 2034765 ATCCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCG 2034706 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812 || || | |||| ||| || || || | ||| | || ||||| |||||| Sbjct 2034705 AACAGGTATGTCTTCTCTTTGGGGTCCTTCACGTAGGTGTCGATGAGGAGTGAATA 2034650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507023616680