Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq21 208 8e-49 seq12 123 2e-23 seq9 102 8e-17 >seq21 Length=3175452 Score = 208 bits (230), Expect = 8e-49 Identities = 516/787 (66%), Gaps = 67/787 (9%) Strand=Plus/Minus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 |||| | |||||| || ||||| ||||| || |||| | | | || | |||||| Sbjct 2035119 AGCAAACGGTCGGCGACAAACTCAATGTACTGACACATAAGCTTGGAGTTCATGCCCAGC 2035060 Query 132781 AGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | || || || ||||||||||| | ||| | || ||||| ||||| || ||||||| Sbjct 2035059 AAACCGACAGGGAGCGCTTCGGTTAAGAACTCCTTT-TCGATAGCGACTGCCTCGGTGAT 2035001 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGT-TGCACCAAATGCTTGAACATCAAGCAAG 132898 || | | | | || | | |||| | | ||| | ||| | | || || ||| | Sbjct 2035000 GACGTTCTCGATGAGCTTTG-GATCGGGCTTGTGCTTGAGATGTTGCAGCAGCAGGCATG 2034942 Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTCAAGCC 132956 |||| ||| |||| ||||||||| | || |||||||| || ||||| || | ||| Sbjct 2034941 CAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTCATT--TGAAAAGGTAAGGCC 2034884 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 ||||| ||||| | |||||||| || || || ||||| || |||||||||| Sbjct 2034883 CGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAGAT 2034824 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 ||||||||||| |||||||| ||||| || | | || |||| || ||| || ||| Sbjct 2034823 ACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGGTGGACTCCTTGTCGGAGAT 2034764 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| | ||| ||||| |||||||| | || ||| || || || ||||| || | || Sbjct 2034763 CCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCGAA 2034704 Query 133137 CAAACGGA-GT-TTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATT 133194 | | | | || ||||||| | | ||||||||||||||||||| |||||||| Sbjct 2034703 C--AGGTATGTCTTCTCTTTGGGGTCCTTCACGTAGGTGTCGATGAGGAGTGAATACATC 2034646 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAG--------------------------- 133227 |||||||| | ||||||||| || |||||| Sbjct 2034645 TCCGAGTGGATGTTCTCCATCATGACCTGAAAGCTGCGAAGCCATTAGTGTCTGAGGCAG 2034586 Query 133228 -------------------------CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC 133262 || || ||||| || ||||| ||||||||||| Sbjct 2034585 CAGTGTAGGGGACATGGACGCGTACCCATAGAAGCAGCGTGCCTCAGGGACCTGCACTTC 2034526 Query 133263 TTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322 | |||||||| | |||||| ||||||||||| ||||| || ||||| ||||| Sbjct 2034525 GGCACTAAAACGCTCCAGCAGATTCTCGTTGACGATACCGTCTGAAGCAGCGAAGAAGGC 2034466 Query 133323 CAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGT 133379 || ||||| || ||| | |||||| | || ||||| || | ||| ||| || Sbjct 2034465 AAGAACGTGGGAGACGAAGTAGCGCTCATCGTTGTTCAGTCGGTTGTGCCAATCGTGCAG 2034406 Query 133380 GTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||| ||||| || || || || | |||||||| |||||||| ||||||||| Sbjct 2034405 ATCCTTTGACAGATCGACTTCTTCTGCTGTCCAAAAGCTAGCCTCGGCACGTTTGTACAT 2034346 Query 133440 ACTCCAC 133446 ||||| Sbjct 2034345 GTTCCAC 2034339 >seq12 Length=2267901 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||||||| || || || ||||| |||||||| | || |||||| ||| | Sbjct 993846 ATGCAGATTTTCGTAAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 993905 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| || || ||||| | || | Sbjct 993906 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 993963 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || |||||||| || || | |||||||| | |||||||| Sbjct 993964 AGCAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTACA 994023 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| || || | || || || |||| || ||| | | ||||| Sbjct 994024 ACATCCAGAAAGAGTCAACCCTACACCTGGTCCTCCGTCTTCGTGGCGG 994072 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| |||| || ||| ||| Sbjct 994074 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCAGT 994133 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | || || || || ||||| | || | Sbjct 994134 GACACCATCGACAACG--TCAAGAGCAAGATTCAAGATAAGGAAGGCATTCCTCCAGATC 994191 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | || || || || || || || | |||||||| |||||||| Sbjct 994192 AGCAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACA 994251 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| || ||| | || || ||| | || || ||| Sbjct 994252 ACATCCAGAAAGAATCCACTCTCCATCTCGTCCTCCGT 994289 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || || || | || || ||| | | Sbjct 994530 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACTATTACGCTGGAAGTTGAGAGCTCA 994589 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | ||| || |||| ||||| ||||| || || ||||||| Sbjct 994590 GACACCATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCA 994648 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || || | || ||||| || || || || | || ||||| ||||||||| Sbjct 994649 GCAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGGACCCTATCCGACTACAA 994708 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||| || |||| ||||||||| | || |||| || Sbjct 994709 CATCCAGAAGGAGAGC-ACCTTGCACTTGGTGCTGAGACTGCGAGGTGG 994756 >seq9 Length=4529175 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| ||||| || |||||| | Sbjct 3500875 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCCGACACGATC 3500934 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | ||| || |||| ||||| || || || || | ||||| |||||| | Sbjct 3500935 GACAATGTCAAATCCAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAGCGGTTG 3500994 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||||||||| || || || || | || || || | ||||||||| ||||| ||| Sbjct 3500995 ATCTTCGCGGGCAAGCAACTCGAGGATGGCCGGACGCTGAGCGACTACAATATCCAGAAG 3501054 Query 38433 G 38433 | Sbjct 3501055 G 3501055 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || || || ||||||| ||||| || || | ||| ||||| || || || Sbjct 1601800 GACAAGGAAGGGATCCCTCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAACTCGAA 1601741 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| || ||||||||||||||| |||||| |||| || || |||| ||| Sbjct 1601740 GACGGCCGCACGCTTTCCGACTACAACATCCAGAAGGAATCGACCCTTCACCTGGTCCTG 1601681 Query 38457 CGTTTGAGAGGCGG 38470 ||| | | ||||| Sbjct 1601680 CGTCTCCGCGGCGG 1601667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172656200320