Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq9 345 5e-90 seq12 203 4e-47 >seq9 Length=4529175 Score = 345 bits (382), Expect = 5e-90 Identities = 496/691 (72%), Gaps = 10/691 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||| || || || || || || | |||||| || |||||||| Sbjct 149372 TCAAAGTCCTCACCACCCAGATGAGTGTCTCCAGCAGTGGATTTGACCTCGAAGATACCC 149431 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| | | | ||||||||||| ||||||||||| ||||| || ||||| || Sbjct 149432 TCTTCAATGGTAAGGAGGGAAACATCAAAGGTACCACCACCAAGGTCGAAGATGAGGACA 149491 Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || ||| || | || | ||||| ||||||||||| ||||| || || || || ||||| Sbjct 149492 TTGCGT-TCACCCTCAGTCTTCTTGTCGAGACCGTAGGCGATGGCGGCAGCAGTGGGTTC 149550 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||| || |||| || |||| || || || || || | || ||||| || ||||| | Sbjct 149551 ATTGATGATACGGAGGACA-TTGAGACCGGCGATCAACCCTGCGTCTTTGGTGGCTTGGC 149609 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | ||||| ||||| || || || ||||| || ||||| |||| |||| | ||| | Sbjct 149610 GCTGCGAGTCGTTGAAATATGCGGGGACAGTGACGACGGCGTTGTTGACGGTGCCACCCA 149669 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | || || || || | ||| |||| ||||| || ||||| || ||||||||||| | | Sbjct 149670 GGTATGACTCGGCAGTCTCTCTCATCTTGGTGAGGACCATTGACGAAATCTCTTCGGGTG 149729 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 ||||||||| ||| || || || || || | ||| | || || |||| | | Sbjct 149730 TGAACTGTTTCTCTTCGCCTTTGAATTCGACCTGAATGACTGGCTT-GCCGC--CCTTGT 149786 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| ||||| | | | | ||||| ||| |||| |||| | || | ||||| | Sbjct 149787 CGATGACCTTGAAGGGGAAGTGCTTCATGTCGGCTTGAACCTCGGGATCAGCGAACTTCC 149846 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 ||||| |||||||| ||||| || |||||||| | |||||||| || |||||||| Sbjct 149847 GGCCGATCAGACGCTTCGCATCGAAGACTGTGTTCTGAGGGTTCATCGCGACTTGGTTCT 149906 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || || || ||||| || | | || ||||| ||||| | || ||||| | Sbjct 149907 TGGCGGCATCACCAATGAGACGCTC---AGTGTCGGTAAAGGCGACAAAGGAGGGGGTGG 149963 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 |||| || ||||| ||||| ||||| || || | |||||| | | | ||| ||| |||| Sbjct 149964 TTCGGTTGCCTTGATCGTTGGCAATGATCTCAATGCGGTCATCTCGGAAGATGCCTACGC 150023 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | || || || || |||||||| ||||| || Sbjct 150024 ATGAGTAGGTAGTACCTAAATCGATACCTAT 150054 Score = 170 bits (188), Expect = 2e-37 Identities = 540/828 (65%), Gaps = 17/828 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGAC--CATCTTTTCAATGTCTTCTTTCG 6626 ||||||||| | || ||||| || || || |||| ||| ||||| ||||| || | Sbjct 148424 TCATCTTCAGCCTTGTACTTCTCGGCCTC--GGACAGCATGCGCTCAATCTCTTCCTTGG 148481 Query 6627 ATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 | | | ||||| || || || || ||||| | || || || | | |||| || Sbjct 148482 ACAGACGACCCTTGTCGTTGGTGATGACGATCTTGTTCGACTTGCCGGTGCCCTTCTCGA 148541 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| || |||| ||||| || ||||| | |||||| | || | |||||| || Sbjct 148542 CAGCGGAGACGTTCATGATACCGTTGGCATCGAGATCGAATGTGACCTCAATTTGGGGAA 148601 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 ||| | || || | ||| || || | | || || | || || | |||| ||| Sbjct 148602 CACCGCGAGGAGCAGGTGGGATGCCGGAGAGCTCGAACTTGCCGAGCAGGTTGTTGTCCT 148661 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | | ||| |||||||| ||||||| || ||| | || || || || Sbjct 148662 TGGTGCGAGCACGCTCACCTTCGTAGACTTGGATGAGCACACCGGGCTGGTTGTCGGAGA 148721 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || |||||| | | ||||| | ||||| || || || | | || | ||| | Sbjct 148722 AGGTCGAGAAGGTCTCGGACTTCTTGGTAGGAATGGTGGTGTTGCGCTTGATGAGCGGAG 148781 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| | |||||| ||| |||| || |||||||| || | ||||| ||| || | Sbjct 148782 TCATGACACCACCAGCAGTCTCGATACCGAGAGACAGCGGCGCAACGTC---GAGCAAAA 148838 Query 6987 GG---TC-TTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 || || ||| | || | | | ||||| | | |||||| || || || | Sbjct 148839 GGATTTCGTTGGTC-GACTTGGACGAGGTATCACCAGACAGGATGGCAGCCTGAACTGCA 148897 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || ||||| |||||||| || | || || |||| || || || || Sbjct 148898 GCACCGTAGGCCACAGCCTCGTCGGGGTTGATGGACTTGTTGGGTTCCTTGCCATTGAAG 148957 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || || | | | || || || || || || || |||||||||||||||||| Sbjct 148958 AAGTCGGAGACAAGCTTCTGGATGCGAGGAATACGAGTGGAGCCACCGACCAAAACGATT 149017 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | || ||||| |||||||| | || || || |||||||||||||| Sbjct 149018 TCGTGGACGGAAGATTTGTCGATCTTGGCATCACGGAGCACACGCTCGACAGGTTCCAT- 149076 Query 7220 CATTTA-CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278 | | | ||||| | |||| || || || || ||||| |||||||| ||||| || || Sbjct 149077 CGTGGATCGGAAGAGGTCCTGGCAGAGCTCTTCGAAACGAGCACGGGTGATGGAGGTGTA 149136 Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAA 7338 ||| || | || ||||| | || || |||||||||| || || || | ||||| | Sbjct 149137 GAAGTCGATACCTTCGTAGAGGGAGTCGATTTCAATGGAAGTCTGGGCGGAAGAAGAGAG 149196 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 || ||||| || ||||| || || || || | ||| || || || || Sbjct 149197 AGTGCGCTTGGCACGCTCGCAAGCGGTGCGGAGACGTCGGAGTGCGCG 149244 >seq12 Length=2267901 Score = 203 bits (224), Expect = 4e-47 Identities = 376/541 (70%), Gaps = 13/541 (2%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 || || ||||| || || || || | || |||||| |||||||| ||||||| || Sbjct 1554848 TCTTCGAAACGGGCGCGAGTGATCTGAGCATTGAAATCTTCGCCGTCGAATAACGAGTCG 1554907 Query 7307 ATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 || |||| || ||||||| |||| | | | |||| ||| || || || || || | Sbjct 1554908 ATCTCAACCGTGGTTTGTGTCCCGTTTGACAGA--GTTCTCTTGGCACGTTCGCAGGCGG 1554965 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424 | || | | ||||| ||||| | | ||| || || || ||||| ||| |||| | Sbjct 1554966 TACGCAGTCTTCGAAGAGCACGGGCATCACCAGACATGTCCTTCTTTGTTTTTCGTTGGA 1555025 Query 7425 ACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 | || | |||||| |||| | || | | ||||| |||| ||| |||||||| || Sbjct 1555026 ATTCCTTCTTGAAGTGCTCGA-GAAGGTTGGTGTCGAAGTCTTGACCGCCCAAGTGGGTG 1555084 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || ||||| || |||||| |||| || |||| ||||| | | || ||||| Sbjct 1555085 TCGCCTGCGGTGGCCTTGACTGTGAAGACGCCGCCTTGGATGTTCAGGAGTGAGACATCG 1555144 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTCTTA 7600 || ||||| || || || || | || || ||||| || | ||| |||| || | Sbjct 1555145 AAAGTACCGCCGCCGAGATCGTAGATCAGGACGTTTCGCTCCTTGTCGGATTTGC-CTGA 1555203 Query 7601 TC-GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCA 7658 | ||||||||| || ||||| || ||||| ||||| || || ||||| || ||| || | Sbjct 1555204 GCCGAGACCGTAGGCAATAGCGGCGGCCGTAGGTTCGTTGATGATACGGAGGACA-TTGA 1555262 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||||||||| | | ||||| || || ||||||| || ||||| |||||||| | Sbjct 1555263 GGCCAGCAATGGCGCCAGCATCCTTGGTAGCTTGTCTCTGATTGTCGTTGAAGTAGGCTG 1555322 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 |||| || ||||| || | | ||||||||| ||||| | | || |||| || |||| Sbjct 1555323 GGACGGTGACGACGGCTTTTGAGACTTTCTTGCCGAGCTTGGTCTCTGCGACCTCCTTCA 1555382 Query 7779 T 7779 | Sbjct 1555383 T 1555383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132617399320