Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10 257 2e-63 seq21 95.1 1e-14 >seq10 Length=3900288 Score = 257 bits (284), Expect = 2e-63 Identities = 1135/1760 (64%), Gaps = 65/1760 (4%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TG 109457 ||| | | ||| || || ||||| || || |||||||| |||||| || || | || Sbjct 3136800 GCCATGGTGCGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCA-GCCAGCAAAGTG 3136742 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517 ||| || | || |||| | ||||| || || | ||||| || || ||||| Sbjct 3136741 CATGGATGTGATTTTGCCCATGGTCGGTTCCTTCAAGTGGATGTTCAGAGATTGGGACTG 3136682 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCA 109577 |||||||| ||| || || |||||||| | || ||| | ||| || |||||||| Sbjct 3136681 GTCGATGAAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACTGATTTCCCA 3136622 Query 109578 GACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCC 109637 ||||||||||||||| |||||| ||| | || |||| |||||| |||| || || Sbjct 3136621 GACAGTCTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACC 3136562 Query 109638 ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC 109697 |||| | | || | | |||||| | | |||||||| || | | || || Sbjct 3136561 ACCATCGGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTC 3136502 Query 109698 GT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755 | ||||| ||| |||||| || ||| |||||||| || || ||| ||| Sbjct 3136501 CTTCAACAGCCATGG--GTTGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAG 3136444 Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815 ||||| | || || || || || || || |||||||| || || || | || || || Sbjct 3136443 ATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCG 3136384 Query 109816 GTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG- 109874 || ||||||||||| | || ||| ||| || | ||| ||| ||| | | || Sbjct 3136383 GTAGGCATGGGAGCAACAAGCAGAGAGTTGCGAA--CCC--CGTATTTGGCAA-TGTCGG 3136329 Query 109875 ----CATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 || || |||||| || | | | | ||| | ||| |||||| || Sbjct 3136328 CCTTCAGTGAGTCCCAGTCCCACAGGTCGGAAGG---AGT---AACATTCCACATGTCGT 3136275 Query 109931 GTTGAAGTACACCCTCAGCAG-CAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACC 109989 ||| || | ||| | || | || |||| | | | || || | || | || Sbjct 3136274 ATTGGAG-AGTGCCTTGGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTGCTCC 3136216 Query 109990 TCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 || | |||| ||||||| || || || || || || |||||||| || || Sbjct 3136215 CTTGCAAGCTCGCATGAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATG 3136156 Query 110050 TTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CA---CAAAGAATAAACACATC 110105 || | | |||| ||| | |||| ||||| |||| || ||| |||| |||| Sbjct 3136155 TTGAGTTGTCGAGCCTCCGGAGAGTCAAAGGGCAGACGCAGGGCAAGGAATG----CATC 3136100 Query 110106 CGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGT 110165 || ||||| |||||||| |||||||| ||||| || |||||| | | || | | Sbjct 3136099 AGCAAGACCTTGAACACCAAGACCAATAGGGCGGTGTCGCATGTT-GCTCTTCTTG--GC 3136043 Query 110166 TTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTT 110222 ||| || || || ||||| |||||||| | || | ||| ||||| | Sbjct 3136042 CTCTGGCACAGGATAGTAGTTGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTG 3135983 Query 110223 CGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC---CTTATT-GACATATT 110278 |||| || ||||| | || | || || ||| | | ||| | |||| | Sbjct 3135982 GGTGACCTCGTGGAGGCGGCCGAAGTCATAC----TCGCCACGGCCTTGGTCGACAAAGG 3135927 Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 | || ||||| | ||| || |||||||| |||| | ||| || | | ||||| || | Sbjct 3135926 TTGGAAGAGCCAGAGAAGCCAGATTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGA 3135867 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 ||| || || || | ||||| || |||| |||||||||||||| || || Sbjct 3135866 CAATCTCGGTGCAGAGATTGGAGCTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCC 3135807 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 |||||| |||||||| ||||||||||| || ||||| || || ||||| | || || | Sbjct 3135806 TGTTGCAGGCATCCTTGTAGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGA 3135747 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGT-TG-CGTTAGCGA-GACCTTCCTCCTCG 110514 |||| | ||| | | || | ||| ||| || || || || | | || |||| ||| Sbjct 3135746 TGGCATACCACAGCTTCTG-GGCCTTGACTGTCTGACG---GCCACGGCCCTCCTTTTCG 3135691 Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG 110574 || | ||| | |||| || || | ||||||||||| | |||||| || | Sbjct 3135690 TATCTCTCGTAGAGCTCCTTGAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCA 3135631 Query 110575 TCGGGACAGAAGAGGGACCAATTTCC--ACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632 | || ||||| || | ||| |||| || ||| || | || |||||||| ||| | Sbjct 3135630 TGAGGGCAGAAAAGAGTCCA--TTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGG 3135573 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 || |||||||||| |||| | |||||| || || || | || ||||| | Sbjct 3135572 GAGTCCACATCGCATAGAACAAGTCACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTC 3135513 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 ||| | ||| || || | || ||| | |||||| || || | |||| |||| | | Sbjct 3135512 TTAGGTTCAAGAACTCAAAGACATCGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGC 3135453 Query 110753 CCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCA 110809 || || | || |||||| || ||||| || ||| |||||| || | ||||| Sbjct 3135452 CCGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTATTGAACACACGGAGCA 3135393 Query 110810 TAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAA 110869 | ||||| | |||| || ||||| || || ||| ||| | ||||||| Sbjct 3135392 TGGGAATGAGGCCATTTGAGGTTCCATTGGTTCCTGCAATATAGGATCCCGTTGCACGAA 3135333 Query 110870 TGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTG 110928 || ||| || | ||||||||||| || ||| || |||||| ||| || Sbjct 3135332 TGCAGTGAGCATTGAGGCCAATACCACCAGCTGTCTTGGAGATCATGGCACACGTCT-TG 3135274 Query 110929 AGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGAC 110988 || || | || ||||| || || || |||| || | || | ||||| || || Sbjct 3135273 AGAGTGTCGTAGATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGAT 3135214 Query 110989 ATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA-CAGACC 111047 | ||| || | ||||||||||||||||||||||| || | |||||| |||| || | Sbjct 3135213 AGCTGGGGCTGTGGCGTTCCCGCATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC 3135154 Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAAT 111107 |||||||| |||||||| |||| || | ||| | ||||| || || | Sbjct 3135153 -TGGGACATGAGATTGTATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGGATGCCGAC 3135095 Query 111108 GGCAACTCGCATGAACATAT 111127 || || ||||||| ||||| Sbjct 3135094 AGCCACACGCATGATCATAT 3135075 >seq21 Length=3175452 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || ||||||||||| ||||| ||| ||| || ||||| || || | || Sbjct 2034924 CCCTCGTCACGAGAGATGAGTTCATTTGAAAAGGTAAGGCCCGGCATCAGGCCCTTGCTC 2034865 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||| ||| || || ||||||||||| ||||| || |||||| Sbjct 2034864 TTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAGATACCCTCGACGGCTGCGAAA 2034805 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 || | || || | ||| |||||| || |||||| || |||| | |||||||||| Sbjct 2034804 GCAACCAGTCGTTGAGC-AAAGGTGGACTCCTTGTCGGAGATCCACCTCAGAGCCCAGTC 2034746 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 |||||| |||||||||| || | ||| || ||||| || Sbjct 2034745 GGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCGAACAG 2034701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975830669400