Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10 277 2e-69 >seq10 Length=3900288 Score = 277 bits (306), Expect = 2e-69 Identities = 1124/1741 (65%), Gaps = 55/1741 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGA 105648 ||||| |||||||| ||||||||||| || ||||| || || | ||||| || | Sbjct 3136791 CGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCA-GCCAGCAAAGTGCATGGATGT 3136733 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGA---TTCATACTTTGACTCTGGTCAAT 105705 || ||| ||| || || |||| | || | |||| | ||| |||||| || Sbjct 3136732 GATTTTGCCCATGGTCGG---TTCCTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGAT 3136676 Query 105706 GAAGCGACCACGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTGATTTCCCACACTG 105764 |||| ||| || | ||||||||| | | || ||| | || ||||||||| || | Sbjct 3136675 GAAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACT-GATTTCCCAGACAG 3136617 Query 105765 TGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCG 105824 | ||| | |||||| ||| | ||||| | | ||| || |||| |||||| || Sbjct 3136616 TCTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACCACCAT 3136557 Query 105825 CCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA 105884 | || || | | |||||| | | ||||| || |||| | || || || | Sbjct 3136556 CGGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCA 3136497 Query 105885 CGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTT 105942 || ||| |||||| | | |||||| || || ||| | | ||||||||| Sbjct 3136496 ACAGCCATGG--GTTGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTT 3136439 Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002 | || || || ||||||||||| || || || | || || | ||| || || || || Sbjct 3136438 GGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGG 3136379 Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062 ||| || || | | ||| ||| |||| || | || ||| |||| || Sbjct 3136378 CATGGGAGCAACAAGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGCCTTCAGTGA 3136319 Query 106063 ATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 |||||||| | | | || | || |||| |||| || |||| || |||| Sbjct 3136318 GTCCCAGTCCCACAGGTCGGAAGGAGTAACATTCC-ACATGTCGTATTGGAGAGTGCCTT 3136260 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181 |||| || ||||| |||| ||||||| ||||| || || | || ||| Sbjct 3136259 GGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTG--CT----CCCTTGCA-AGC 3136207 Query 106182 TCGCCTC---CAGGGAT----GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCC 106234 |||| | ||| || ||||| || ||||| |||||||| | || | | Sbjct 3136206 TCGCATGAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGT 3136147 Query 106235 TTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTTG 106293 || || || ||||| | | || ||| || ||| |||| || |||||||| Sbjct 3136146 CGAGCCTCCGGAGAGTCAAAGG-GCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTTG 3136088 Query 106294 AACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGAT 106352 |||||| | ||||||||| | ||||||||| || ||| || ||| || |||| Sbjct 3136087 AACACCAAGACCAATAGGGCGGTGTCGCATGTTGCTCTTCTTGGCC-TCTGGCACAGGAT 3136029 Query 106353 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAA 106412 | | || |||| |||| ||| | ||| ||| || | | |||| || || | Sbjct 3136028 AGTAGTTGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGGA 3135969 Query 106413 GTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATG 106472 | | | ||| | || | ||| | |||| | ||||||| || | || | Sbjct 3135968 GGCGGCCGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAAG 3135909 Query 106473 CCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGT 106532 ||| |||||| ||||| ||||||| |||||||||| | ||| || || || | | Sbjct 3135908 CCAGATTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGAT 3135849 Query 106533 TGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGT 106592 |||| || ||| || ||||| ||||| ||||| ||||| ||||||| |||||||||| Sbjct 3135848 TGGAGCTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGT 3135789 Query 106593 AGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCG 106651 ||||||||||||| || |||||||| ||||| | || || || || | ||||| | || Sbjct 3135788 AGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCT 3135729 Query 106652 GCGGCTGGTACAATGGC-GTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709 | | || | | || | | |||| || |||||| ||||| | |||||| | | Sbjct 3135728 GGGCCTTG---ACTGTCTGACGGCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCT 3135672 Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769 || || || || | | |||| |||||||| || | | || |||||||||| || Sbjct 3135671 TGAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTCC 3135612 Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829 ||| || ||| || |||| |||||| | ||| ||| |||||| | | || | Sbjct 3135611 ATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACA 3135552 Query 106830 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 106889 || | | ||| || || | || ||||| || || | | |||||| | || Sbjct 3135551 AGTCACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGA 3135492 Query 106890 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTT 106946 ||| |||||||| ||||| | |||| |||| || ||| ||| | || | | Sbjct 3135491 CATCGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCT 3135432 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 | | || ||||| || ||| || || || || ||||| ||||| | |||| ||| Sbjct 3135431 GGTCGACGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGG 3135372 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA-TGTGCAT---- 107061 ||||| || || |||| ||| | || | ||| | || |||| Sbjct 3135371 TTCCATTGGTTCCTGCAATATAGGATCCCGTTGCAC-----GAATGCAGTGAGCATTGAG 3135317 Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121 |||||||| ||||| ||| ||||| |||||| | | ||||| | |||||||| Sbjct 3135316 GCCAATACCACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACC 3135257 Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181 | ||| ||||||||| || |||| | |||||| ||| | ||| || ||| || Sbjct 3135256 CTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGT 3135197 Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGTCGT 107240 || ||||||||||| || || | ||| ||| |||| || | |||||||| | || Sbjct 3135196 TCCCGCATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC-TGGGACATGAGATTGT 3135138 Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300 ||||||| | | | ||||| || || ||||||||||||| ||||||||||| | || Sbjct 3135137 ATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCA 3135078 Query 107301 T 107301 | Sbjct 3135077 T 3135077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980630380520