Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq10 104 3e-17 >seq10 Length=3900288 Score = 104 bits (114), Expect = 3e-17 Identities = 269/400 (67%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || | ||||| | || || |||||||| || ||||| |||| ||||| Sbjct 1516061 GAAAGGTCTGCCTCATACCTGTCTCTGCGCATGGAACAAACCCTGCGTCAGCTGCCATGG 1516120 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGAT-GGTAACATAGACATCAAAG 154827 | || ||||| ||||| | ||||| ||| | || || || | ||| || ||| Sbjct 1516121 CGGGCATGAAGGTTGTTCCGCTGAAGTGCGATACCAAGACCGGCAATCTGGACGTCCAAG 1516180 Query 154828 ATCTAGAGAAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATA- 154885 | || ||| ||| || | | | ||| ||| ||| | || ||||| || || Sbjct 1516181 ACCTCAAGAGTAAATGCGAGAA-GCATAAGGATGACCTGGCCGCCATCATGATCACCTAT 1516239 Query 154886 CCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGA 154945 |||| | || ||||| || || | || ||| | | ||| |||||||||| || Sbjct 1516240 CCCAGC-ACGTTCGGTGTCTTCGAGCCGGCGATCAGAGAAGTTTGTGAGATCGTTCACGA 1516298 Query 154946 CAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAA 155005 | || ||||| || ||| | ||||| || ||||| ||||| || | || || | | Sbjct 1516299 GCACGGGGGTCAAGTGTATATGGATGGGGCGAATCTCAATGCTCAAATCGGCCT-GTGCA 1516357 Query 155006 ACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTC 155064 ||| || | ||| || || || || || ||||| || | || || || ||||| || | Sbjct 1516358 ACCCTGGGGATATTGGCGCCGACGTCTGCCATCTGAATCTGCACAAGACTTTCTGCATCC 1516417 Query 155065 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | ||||| ||||||||||| || || || ||||| ||||| Sbjct 1516418 CTCATGGTGGTGGAGGTCCCGGTGTTGGACCTATCGGTGT 1516457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212633476320