Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq10 125 8e-24
>seq10
Length=3900288
Score = 125 bits (138), Expect = 8e-24
Identities = 274/401 (68%), Gaps = 11/401 (3%)
Strand=Plus/Plus
Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445
|||| || || | ||||| | || || |||||||| || ||||| ||||| | ||||
Sbjct 1516061 GAAAGGTCTGCCTCATACCTGTCTCTGCGCATGGAACAAACCCTGCGTCAGCTGCCATGG 1516120
Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGAT-GGCAACATAGACATCAAAG 159502
| || ||||| ||||| | ||||| ||| | || ||||| | ||| || |||
Sbjct 1516121 CGGGCATGAAGGTTGTTCCGCTGAAGTGCGATACCAAGACCGGCAATCTGGACGTCCAAG 1516180
Query 159503 ATCTAGAGAAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAT 159561
| || ||| ||| || | | | ||| ||| ||| | || ||||| || |||
Sbjct 1516181 ACCTCAAGAGTAAATGCGAGAA-GCATAAGGATGACCTGGCCGCCATCATGATCACCTAT 1516239
Query 159562 CCATCTACACAT--GGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATG 159619
|| | ||| | ||||| || || | |||||| | | ||| |||| ||||| |
Sbjct 1516240 CC--CAGCACGTTCGGTGTCTTCGAGCCGGCGATCAGAGAAGTTTGTGAGATCGTTCACG 1516297
Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679
|| | || ||||| || ||| | ||||| || ||||| ||||| || | || || |
Sbjct 1516298 AGCACGGGGGTCAAGTGTATATGGATGGGGCGAATCTCAATGCTCAAATCGGCCT-GTGC 1516356
Query 159680 AACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT 159738
|||| || | ||| || || || || || ||||| || | || ||||| ||||| ||
Sbjct 1516357 AACCCTGGGGATATTGGCGCCGACGTCTGCCATCTGAATCTGCACAAGACTTTCTGCATC 1516416
Query 159739 CCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|| ||||| ||||||||||| || || || ||||| |||||
Sbjct 1516417 CCTCATGGTGGTGGAGGTCCCGGTGTTGGACCTATCGGTGT 1516457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051030935280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |