Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq12 159 8e-34
seq10 118 2e-21
>seq12
Length=2267901
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||| | ||| || || |||||||| || || || || |||||||| | || || | ||
Sbjct 994517 TCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCC 994458
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
||||| ||||||||||| |||||||| | |||||||||||| || || ||||| || ||
Sbjct 994457 GTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTT 994398
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|| ||||| || ||||||||| ||||| ||||| ||| ||| || || || || |
Sbjct 994397 ATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGAT 994338
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||||| || ||||| ||||| || || | ||||||
Sbjct 994337 CGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
Score = 145 bits (160), Expect = 2e-29
Identities = 160/211 (76%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||||| ||||| || || ||||| |||| ||| || | ||||| |||
Sbjct 994282 ACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCG 994223
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || || ||||| || ||||| || ||||||||||||||||| || ||||||
Sbjct 994222 AGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCTTGA 994163
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| || ||||||||| || ||||||| | | || || || || || || | ||||
Sbjct 994162 ATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGAC--TCAACCTCGAGAGTGATGGTCT 994105
Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || |||| || || ||||| | ||||||
Sbjct 994104 TGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 132 bits (146), Expect = 1e-25
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || |||||||| || || ||||| ||| || || | ||||| |||
Sbjct 994054 ACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 993995
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| ||||| |||||||| || || || || || |||||||||||||| ||||| ||
Sbjct 993994 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 993935
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| || |||||| || || ||||||| | | || || || ||||| || | ||||
Sbjct 993934 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGAC--TCGACCTCAAGAGTGATGGTCT 993877
Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || |||| || |||||||| | |||||
Sbjct 993876 TGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846
>seq10
Length=3900288
Score = 118 bits (130), Expect = 2e-21
Identities = 194/280 (69%), Gaps = 0/280 (0%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||| || || |||||| |||| | |||||| || | || | | || ||| |||
Sbjct 3135554 TTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGAGAAGAACCAGGAATGG 3135613
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| |||||||| || ||||||| || || |||| ||||| || || ||| ||| ||
Sbjct 3135614 ACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTACGGCGACGACTTCAAG 3135673
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768
|| || || ||||||||||| ||||| | | | || || |||||||| |
Sbjct 3135674 GAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGACAGTCAAGGCCCAGAAG 3135733
Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828
|||||| || |||||||| ||||| ||| ||||| |||| || ||||||
Sbjct 3135734 CTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTCCCTACATGCTCTACAAG 3135793
Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868
|||||| | | ||||| |||||||||||||| ||||
Sbjct 3135794 GATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAA 3135833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481273049641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |