Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 1e-15 >seq21 Length=3175452 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002 ||||||| | || || ||||||||||| || | |||||||| | | || | | Sbjct 2034963 AGATGTTGCAGCAGCAGGCATGCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGT 2034904 Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062 ||||| ||||| || | || |||||||| || | | || | |||||| || | ||| Sbjct 2034903 TCATTTGAAAAGGTAAGGCCCGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCG 2034844 Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122 || || || |||||||| ||||| || || ||||| |||||||| |||| || || | Sbjct 2034843 AACGACCCGGAAAAGAAGATACCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAG 2034784 Query 19123 CTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 | | || || | ||||| |||| ||||| || |||||||| Sbjct 2034783 GTGGACTCCTTGTCGGAGATCCACCTCAGAGCCCAGTCGGCCTTCTT 2034737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108638393720