Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq12 98.7 8e-16
>seq12
Length=2267901
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || |||||||| || || ||||| |||| | || | |||| || | |||
Sbjct 994277 ATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGTTG 994218
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | ||| || ||||| || ||||||||||| ||||||||||| ||
Sbjct 994217 CTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTT 994158
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | |||||| | || || || ||||||| || ||||| ||
Sbjct 994157 GCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGATGGTCTTGCCAGT 994098
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| || || || || || |||||
Sbjct 994097 CAGGGTCTTCACGAAGATTTGCAT 994074
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| ||| | || | | |||| || | ||
Sbjct 994048 TGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGT 993989
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || || | ||||| ||||| || ||||||||||| || || || || ||
Sbjct 993988 TTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTG 993929
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| | || || |||||||||| || ||||| ||
Sbjct 993928 CTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTC 993869
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || ||||| || ||||||||
Sbjct 993868 AGGGTCTTTACGAAAATCTGCAT 993846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278288918211
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |