Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 5e-15 >seq13 Length=1976773 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/156 (74%), Gaps = 9/156 (6%) Strand=Plus/Plus Query 81299 CGTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAGTCCTCGTCCACCACGCCGGCCA 81358 |||||| | ||| | ||||||||||||||| |||||| |||| | ||||||||| Sbjct 1254670 CGTGGTTGAACAGCAACACCTTGACCTCGCCGCGGTAGTCGGCGTCGATCACGCCGGC-- 1254727 Query 81359 GGACC---CCGATG---CCCTTGACGCCCAGGCCCGAGCGCGGCGCGACGCGGGCATAGG 81412 | || ||||| ||| | |||||||||| |||||||||| ||| | || | Sbjct 1254728 -GCCCGTGTCGATGAAATGTTTGGCCGCCAGGCCCGACCGCGGCGCGATCCGGCCGTACG 1254786 Query 81413 TTCCCTCGGGCGCGGTGATCGAGAGGCCCGTCGACA 81448 | |||||||||| || ||||||||| ||||||||| Sbjct 1254787 TGCCCTCGGGCGTGGCGATCGAGAGCTCCGTCGACA 1254822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701362998358080