Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq21 111 3e-19 >seq21 Length=3175452 Score = 111 bits (122), Expect = 3e-19 Identities = 175/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| | ||| ||||| ||| ||| ||||| | |||||| ||||| ||| | Sbjct 2034701 CTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGG 2034760 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 |||||| | | || | || |||| | || ||||| || || || || || ||| Sbjct 2034761 TGGATCTCCGACAAGGAGTCCACCTTTGCTCAACGACTGGTTGCTTTCGCAGCCGTCGAG 2034820 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 || ||||| || ||| ||||| || || ||||||||||||||| ||||| ||| Sbjct 2034821 GGTATCTTCTTTTCCGGGTCGTTCGCTGCAATCTTCTGGCTCAAGAGCAAGGGCCTGATG 2034880 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025 || || || |||||| || || |||||| | |||||||| | |||| |||||| Sbjct 2034881 CCGGGCCTTACCTTTTCAAATGAACTCATCTCTCGTGACGAGGGCATGCACACCGATTTT 2034940 Query 26026 GCCTGCCTGCT 26036 || |||||||| Sbjct 2034941 GCATGCCTGCT 2034951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844532957120