Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 102 5e-16 >seq12 Length=2267901 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || ||||| || || |||||| | || || || | || || Sbjct 994295 ACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGT 994236 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || ||||||||||| ||||| || |||||||| ||||| |||||||| || Sbjct 994235 GCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCC 994176 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||| ||||||||||| ||||| || || || ||| || | || || Sbjct 994175 TTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACCTCGAG 994116 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| ||||| ||||| Sbjct 994115 AGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTG 994077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178213418404