Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq10 118 1e-21 >seq10 Length=3900288 Score = 118 bits (130), Expect = 1e-21 Identities = 270/399 (68%), Gaps = 7/399 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||| ||||| || || || ||||||||||| ||||| || || ||||| ||||| || Sbjct 1516457 ACACCGATAGGTCCAACACCGGGACCTCCACCACCATGAGGGATGCAGAAAGTCTTGTGC 1516398 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | ||| ||||| || || || || || ||| | || |||| | || || | || || Sbjct 1516397 AGATTCAGATGGCAGACGTCGGCGCCAATATCCCCAGGGTTGCAC-AGGCCGATTTGAGC 1516339 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 ||| ||||| || ||||| | ||| || ||||| || | || |||||||||| ||| | Sbjct 1516338 ATTGAGATTCGCCCCATCCATATACACTTGACCCCCGTGCTCGTGAACGATCTCACAAAC 1516279 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | |||||| | || || ||||| || ||||| || ||||| || | Sbjct 1516278 TTCTCTGATCGCCGGCTCGAAGACACCGAACGTGCTGGGATAGGTGATCATGATGGCGGC 1516219 Query 138422 GAGTTCAAATGTATTCATGATTGC-TTTCTTCTCTAGATCTTTGATGTCTATGTTGCC-A 138479 || ||| ||| | | | || ||| ||| || |||| || ||| | ||||| Sbjct 1516218 CAGGTCATCCTTATGC-TTCTCGCATTTACTCTTGAGGTCTTGGACGTCCAGATTGCCGG 1516160 Query 138480 TCAT--CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGAT 138537 || | ||| ||||| | ||||| ||||| || |||||| | || ||||| | Sbjct 1516159 TCTTGGTATCGCACTTCAGCGGAACAACCTTCATGCCCGCCATGGCAGCTGACGCAGGGT 1516100 Query 138538 TAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 | |||||||| || || | ||||| || || || |||| Sbjct 1516099 TTGTTCCATGCGCAGAGACAGGTATGAGGCAGACCTTTC 1516061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998233537960