Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10 262 5e-65 >seq10 Length=3900288 Score = 262 bits (290), Expect = 5e-65 Identities = 696/1052 (66%), Gaps = 27/1052 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| | ||| ||||||| || || ||||||||||||| || || ||||| | | Sbjct 3135068 CCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGACGATATTGAGAAGGCC 3135127 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| | |||||||| | || |||| ||| ||| | || || ||||| Sbjct 3135128 ATCGAGACATACAATCTCATGTCCCA-GAAGTGCTTCACTCATGCATCCCCGACACTCTT 3135186 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| || || ||| || ||| | ||| |||||| | |||| || |||||||| Sbjct 3135187 CAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGAAGGAGGA 3135246 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | |||||||| | ||||| | | |||||| ||||| ||| ||||| Sbjct 3135247 CAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACAGCTGG 3135306 Query 75451 GGGTATTGGG----ATGCACA-TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 |||||||| |||| || | ||| | || | ||| |||| || Sbjct 3135307 TGGTATTGGCCTCAATGCTCACTGCATTC-----GTGCAACGGGATCCTATATTGCAGGA 3135361 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| ||| |||| | ||||| ||||| || || || || ||| || ||| Sbjct 3135362 ACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCGC 3135421 Query 75566 TATGTAAATCAAGCGGGGCGTC-----GCAA--GGGGTCCATCGCGGTCTACTTGGAACC 75618 || || | || ||||| | || | ||| | |||| |||||||||| || Sbjct 3135422 TACGTCGACCA----GGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCC 3135477 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| |||||| || | |||||| | | || || ||||| || | || || Sbjct 3135478 CTGGCACGCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAAT 3135537 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 ||| | | || | || | | |||||| ||| ||| | |||||| |||| || || Sbjct 3135538 CCGGGCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGA 3135597 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | || ||||| |||||||||| || | | || |||||||| |||| | | Sbjct 3135598 GAAGAACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTA 3135657 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 || || || || | | |||||| | || ||| ||||||| | | | | ||| Sbjct 3135658 CGGCGACGACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGAC 3135717 Query 75859 TGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || | || | | || | | ||| | || || || | | ||||| ||||| || || | Sbjct 3135718 AGT-CAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTC 3135776 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | || ||||| ||||||||||| || |||| |||||| ||||| ||||| |||||||| | Sbjct 3135777 CCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACCA 3135836 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 | ||||| ||||| ||||| || ||| | |||||||||| ||||||| |||| Sbjct 3135837 TTCGAAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCCCGGATGAGGTTGCTG 3135896 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTG 76097 | |||||| |||| || | || ||||||| | |||| | ||| | || | || Sbjct 3135897 TCTGCAATCTGGCTTCTCTGGCTCTTCCAACCTTTGTCGACCAAGGCCGTGGCGAGTATG 3135956 Query 76098 ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | | | || || || |||| | | || ||| ||| | ||| |||| | Sbjct 3135957 ACTTCGGCCGCCTCCACGAGGTCACCCAAGTGGTGACCCGCAATTTGAACAAGATCATCG 3136016 Query 76158 ACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 ||| || | ||||| || ||| || ||| || ||||||||| | |||||| Sbjct 3136017 ACATCAACTACTATCCTGTGCCAGA-GGCCAAGAAGAGCAACATGCGACACCGCCCTATT 3136075 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATT 76248 ||| | |||||||||||||| || |||| ||| Sbjct 3136076 GGTCTTGGTGTTCAAGGTCTTGCTGATGCATT 3136107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569428486240