Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq9 309 4e-79 seq12 217 2e-51 seq10 168 9e-37 seq13 165 1e-35 >seq9 Length=4529175 Score = 309 bits (342), Expect = 4e-79 Identities = 485/689 (70%), Gaps = 9/689 (1%) Strand=Plus/Minus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || |||||||||||||| ||||| |||||||| || || | | | | |||| || | Sbjct 150054 ATAGGTATCGATTTAGGTACTACCTACTCATGCGTAGGCATCTTCCGAGATGACCGCATT 149995 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 ||||| || | || || ||||| ||||| || || || || | || |||||||| || Sbjct 149994 GAGATCATTGCCAACGATCAAGGCAACCGAACCACCCCCTCCTTTGTCGCCTTTACCGAC 149935 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | ||| |||||| |||| |||||||| || || || || ||||||||| || || Sbjct 149934 ACTGAGCGTCTCATTGGTGATGCCGCCAAGAACCAAGTCGCGATGAACCCTCAGAACACA 149875 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| || ||||||||||| || || || ||||| | ||| | || |||| ||| Sbjct 149874 GTCTTCGATGCGAAGCGTCTGATCGGCCGGAAGTTCGCTGATCCCGAGGTTCAAGCCGAC 149815 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTAATG 195599 || ||| ||| | | | ||| | || | | | ||| ||||| | ||| | | Sbjct 149814 ATGAAGCACTTCCCCT-TCAAGGTCATCGACAAGGGCGGC----AAGCCAGTCATTCAGG 149760 Query 195600 TTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGA 195659 | ||||| | || || ||||||| || | |||||||| |||||||| ||||| | | Sbjct 149759 TCGAATTCAAAGGCGAAGAGAAACAGTTCACACCCGAAGAGATTTCGTCAATGGTCCTCA 149700 Query 195660 TTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGA 195719 ||||||| |||||||| || || | | ||||| || || || | || || || | Sbjct 149699 CCAAGATGAGAGAGACTGCCGAGTCATACCTGGGTGGCACCGTCAACAACGCCGTCGTCA 149640 Query 195720 CTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTG 195779 |||| || || || |||| || || || || || || || || ||||| | || | Sbjct 149639 CTGTCCCCGCATATTTCAACGACTCGCAGCGCCAAGCCACCAAAGACGCAGGGTTGATCG 149580 Query 195780 CGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | ||||| || |||| | | || ||||||||||| || || || || || || || ||| Sbjct 149579 CCGGTCTCAA-TGTCCTCCGTATCATCAATGAACCCACTGCTGCCGCCATCGCCTACGGT 149521 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || |||||||| | || | || ||||| | ||||| || || ||||||||||| Sbjct 149520 CTCGACAAGAAGACTGAGGGTGAACGCAATGTCCTCATCTTCGACCTTGGTGGTGGTACC 149461 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||||| || || || | ||||||| ||||| ||||| || || | |||||||| Sbjct 149460 TTTGATGTTTCCCTCCTTACCATTGAAGAGGGTATCTTCGAGGTCAAATCCACTGCTGGA 149401 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || |||||||| |||||||| || || || Sbjct 149400 GACACTCATCTGGGTGGTGAGGACTTTGA 149372 Score = 237 bits (262), Expect = 2e-57 Identities = 546/820 (67%), Gaps = 3/820 (0%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || || || || | || || || || |||||||| || |||||||||||| | || Sbjct 149241 GCACTCCGACGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGCACTCTCTCTTCTTCCGCC 149182 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || |||| || || || | | || || || |||||||| || | || ||| Sbjct 149181 CAGACTTCCATTGAAATCGACTCCCTCTACGAAGGTATCGACTTCTACACCTCCATCACC 149122 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| |||||| | | || | || | ||||||||||| || Sbjct 149121 CGTGCTCGTTTCGAAGAGCTCTGCCAGGACCTCTTCCGATCCACGATGGAACCTGTCGAG 149062 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || ||||| || ||||| || || ||| || | ||||| || | || || Sbjct 149061 CGTGTGCTCCGTGATGCCAAGATCGACAAATCTTCCGTCCACGAAATCGTTTTGGTCGGT 149002 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || || |||||||| || || || | | || |||||||||| || || Sbjct 149001 GGCTCCACTCGTATTCCTCGCATCCAGAAGCTTGTCTCCGACTTCTTCAATGGCAAGGAA 148942 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| || || || || || || ||||| || ||||||||||| Sbjct 148941 CCCAACAAGTCCATCAACCCCGACGAGGCTGTGGCCTACGGTGCTGCAGTTCAGGCTGCC 148882 Query 196421 ATTCTCTCAGGTGTTGACAATAATAA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCA 196477 || || || |||| | | || || |||| || | || | || || ||||| Sbjct 148881 ATCCTGTCTGGTGATACCTCGTCCAAGTCGACCAACGAAATCCTTTTGCTCGACGTTGCG 148822 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || ||| | || || || |||||||| |||||| | || | | ||| Sbjct 148821 CCGCTGTCTCTCGGTATCGAGACTGCTGGTGGTGTCATGACTCCGCTCATCAAGCGCAAC 148762 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || ||||| || |||||| | ||| || || | ||||| || || || ||| Sbjct 148761 ACCACCATTCCTACCAAGAAGTCCGAGACCTTCTCGACCTTCTCCGACAACCAGCCCGGT 148702 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | || ||||| || ||||| || || | || | ||||| ||| | || || || Sbjct 148701 GTGCTCATCCAAGTCTACGAAGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGC 148642 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | | || || ||| |||| || | |||||||| || ||| | || Sbjct 148641 AAGTTCGAGCTCTCCGGCATCCCACCTGCTCCTCGCGGTGTTCCCCAAATTGAGGTCACA 148582 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 |||||| | || || || || || | |||||| | |||| || |||| | ||||| Sbjct 148581 TTCGATCTCGATGCCAACGGTATCATGAACGTCTCCGCTGTCGAGAAGGGCACCGGCAAG 148522 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 || | ||||| || || ||||| |||||||| || || || ||||| || ||||| || Sbjct 148521 TCGAACAAGATCGTCATCACCAACGACAAGGGTCGTCTGTCCAAGGAAGAGATTGAGCGC 148462 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| | || || || ||||||| || ||||| |||| Sbjct 148461 ATGCTGTCCGAGGCCGAGAAGTACAAGGCTGAAGATGAGG 148422 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| || || || ||||| || Sbjct 3500874 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAATCCTCCGACACGAT 3500933 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || ||||| ||||||| || || ||||||||||| ||||| || ||||| || | Sbjct 3500934 CGACAATGTCAAATCCAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAGCAGCGGTT 3500993 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || || || || ||||| || || || || ||||| | || || Sbjct 3500994 GATCTTCGCGGGCAAGCAACTCGAGGATGGCCGGACGCTGAGCGACTACAATATCCAGAA 3501053 Query 172050 GG 172051 || Sbjct 3501054 GG 3501055 Score = 95.1 bits (104), Expect = 2e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| Sbjct 1601953 AGTATGCAAATCTTTGTCAAAACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGTCC 1601894 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATA 171958 ||||| ||||| || |||| ||||||| |||| || Sbjct 1601893 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAAGGTA 1601854 >seq12 Length=2267901 Score = 217 bits (240), Expect = 2e-51 Identities = 188/233 (81%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| |||||| | ||||| || || ||||| ||||||||||| | Sbjct 994297 GTGGTATGCAAATCTTTGTCAAAACCTTGACTGGCAAGACGATCACACTCGAGGTTGAAT 994356 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||||||||| || ||| |||| | |||||||| |||||||| ||||| ||||| | Sbjct 994357 CTTCAGACACAATTGACAACGTCAAGACGAAGATTCAGGATAAGGAGGGCATCCCACCGG 994416 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || |||||| | || || |||||||| ||||||||||| || ||||| ||| | |||| Sbjct 994417 ACCAACAACGATTGATCTTCGCTGGTAAGCAGCTTGAAGACGGCCGTACACTCTCAGATT 994476 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || ||||| || ||||| || || ||||| || | || |||||| Sbjct 994477 ACAACATCCAGAAGGAATCCACTCTGCATCTCGTTCTCAGATTGCGTGGTGGT 994529 Score = 194 bits (214), Expect = 2e-44 Identities = 181/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| ||||| ||||| ||||| || || ||||| |||||||||||||| Sbjct 994072 GTATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCA 994131 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||| ||||| ||| |||| ||||||||||||||||||||||||||| || |||| Sbjct 994132 GTGACACCATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAAGGCATTCCTCCAGATC 994191 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| || || ||||| || || || || || ||||| || ||||| | || |||| Sbjct 994192 AGCAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACA 994251 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || || || || ||||| || || || || | || || |||||| Sbjct 994252 ACATCCAGAAAGAATCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGGT 994301 Score = 176 bits (194), Expect = 6e-39 Identities = 413/616 (67%), Gaps = 13/616 (2%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || ||||||| || || |||| || || ||||| ||| Sbjct 1555338 GCCGTCGTCACCGTCCCAGCCTACTTCAACGACAATCAGAGACAAGCTACCAAGGATGCT 1555279 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | || ||||| || || || |||| | | || ||||| ||||| || || || || || Sbjct 1555278 GGCGCCATTGCTGGCCTCAA-TGTCCTCCGTATCATCAACGAACCTACGGCCGCCGCTAT 1555220 Query 195829 TGCTTATGGTCTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCT 195885 ||| || ||||| | | ||| ||| | || ||| || |||||| ||||| Sbjct 1555219 TGCCTACGGTCTCGGCTCAGGCAAATCCGACAAGGAGCGAAACGTCCTGATCTACGATCT 1555160 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 ||| || ||||| || ||||||||||| || || || |||| || | ||| ||| || Sbjct 1555159 CGGCGGCGGTACTTTCGATGTCTCACTCCTGAACATCCAAGGCGGCGTCTTCACAGTCAA 1555100 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA 196005 ||| || || || || || || | || ||| |||| ||||| | |||||| || Sbjct 1555099 GGCCACCGCAGGCGACACCCACTTGGGCGGTCAAGACTTCGACACCAACCTTCTCGAGCA 1555040 Query 196006 TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCT 196065 || | || |||| ||||| | ||||| || || ||||| || | | ||||| Sbjct 1555039 CTTCAAGAAGGAATTCCAACGAAAAACAAAGAAGGACATGTCTGGTGATGCCCGTGCTCT 1554980 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAA 196123 ||| | || | || || || ||||||||||| ||||||| || |||| | ||| Sbjct 1554979 TCGAAGACTGCGTACCGCCTGCGAACGTGCCAAGAGAACTCTGTC--AAACGGGACACAA 1554922 Query 196124 ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGT 196183 || | ||||||||| || ||||| || ||||| || ||| || | || || || Sbjct 1554921 ACCACGGTTGAGATCGACTCGTTATTCGACGGCGAAGATTTCAATGCTCAGATCACTCGC 1554862 Query 196184 GCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGTTGAAC 196241 || ||||| ||||| || || | | | || | || | | | || |||||| | | Sbjct 1554861 GCCCGTTTCGAAGACTTGAATGCCAAGATCTTCAACGGCA--CTCTTGAGCCTGTTCAGC 1554804 Query 196242 AAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 | || || || || || || ||||| |||||||| || ||||| ||||| || | Sbjct 1554803 AGGTTCTCAAGGATGCTGCCATTGACAAGTCAAAGGTTGACGAGATTGTTCTTGTTGGCG 1554744 Query 196302 GATCAACCCGTATTCC 196317 | || |||||||| || Sbjct 1554743 GCTCTACCCGTATCCC 1554728 Score = 165 bits (182), Expect = 1e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| || || || || ||||| ||||| || || ||||| || ||||| ||||| Sbjct 993843 AGGATGCAGATTTTCGTAAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCC 993902 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 ||||| ||||| || |||| |||||| || || |||||||||||||| || ||| Sbjct 993903 AGCGACACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCTGAT 993962 Query 171979 CAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTAC 172038 ||||| || || || || |||||||||||||| || ||||| || ||||| || ||| Sbjct 993963 CAGCAGCGCCTCATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 994022 Query 172039 AACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||| | || || ||||| || |||||||| || || | ||||| || ||| Sbjct 994023 AACATCCAGAAAGAGTCAACCCTACACCTGGTCCTCCGTCTTCGTGGCGGT 994073 >seq10 Length=3900288 Score = 168 bits (186), Expect = 9e-37 Identities = 507/775 (65%), Gaps = 11/775 (1%) Strand=Plus/Plus Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| ||| | || || | || ||||| || || || | || ||| | || || || || Sbjct 3135166 TCATGCATCCCCGACACTCTTCAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTT 3135225 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGA-GTGTG 78167 | | | | | ||||||||| || | ||||| |||| ||||||| ||| ||||| Sbjct 3135226 CTTGATCGACATGAAGGAGGACAGCATCGAGGGTATCTACGACACTCTCA-AGACGTGTG 3135284 Query 78168 CTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACA 78227 | ||| || ||| ||||||||||| || || || |||| ||||||||| Sbjct 3135285 CCATGATCTCCAAGACAGCTGGTGGTATTGGCCTCAATGCTCACTGCATTCGTGCAACGG 3135344 Query 78228 AGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287 ||| ||| |||||| ||||| || |||| | ||||| ||||| | || | Sbjct 3135345 GATCCTATATTGCAGGAACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGT 3135404 Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTA---GGAAGGGGTCATTCGCTA 78344 ||||| || || ||||| ||| |||| | || || | ||| | ||||| | Sbjct 3135405 TCAATAACACGGCCCGCTACGTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCA 3135464 Query 78345 TGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGG 78404 | ||| | || || |||||||||||||| | || || ||| | || | ||||| | Sbjct 3135465 TCTACTTGGAGCCCTGGCACGCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACG 3135524 Query 78405 GTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTA 78464 | | |||||| || | || || ||| ||| ||||||| ||| || | || | Sbjct 3135525 GCAAGGAGGAAATCCGGGCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCA 3135584 Query 78465 TGAAGAGAGTTGAG--GAAGGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGG 78522 || || | || ||| ||| ||| ||||| |||||||||| || || | || || Sbjct 3135585 TGGAGCGTGTCGAGAAGAACCAGG--AATGGACTCTTTTCTGCCCTCATGAAGCTCCAGG 3135642 Query 78523 TCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGG 78582 |||| | ||||| ||||| || || ||| | | | ||| | ||||||| |||| || Sbjct 3135643 TCTTGCCGATGTGTACGGCGACGACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGG 3135702 Query 78583 TCTCGCTATTAAGACAATTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAA 78641 | | | ||||| | | || | ||| || ||| | || || | | || | Sbjct 3135703 CCGTGGCCGTCAGACAGTCAAGGC-CCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGA 3135761 Query 78642 CAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAA 78701 | ||||| || || || || ||||| ||||| || ||| ||||| ||| ||||| | Sbjct 3135762 CTGAGACGGGTACTCCCTACATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGA 3135821 Query 78702 AGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATA 78761 ||||| | || ||| |||||| || || ||||| || ||| | || ||||| | Sbjct 3135822 AGAACTTGGGAACCATTCGAAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCC 3135881 Query 78762 AGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGA 78816 | |||| ||||| || ||||| | ||| | ||||| |||| ||||| || Sbjct 3135882 CGGATGAGGTTGCTGTCTGCAATCTGGCTTCTCTGGCTCTTCCAACCTTTGTCGA 3135936 >seq13 Length=1976773 Score = 165 bits (182), Expect = 1e-35 Identities = 257/361 (71%), Gaps = 11/361 (3%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 || |||||| | || | ||||| || || |||||||| || || | | | || Sbjct 1543916 CCTGAAGAAGTCTCCGCAATGGTTCTGGGCAAAATGAAGGAAGTCGCAGAGGCATACCTG 1543975 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || || | || | | | || || || || || || || ||||||| || | || || Sbjct 1543976 GGCAAGAAGGTCACACACGCTGTCGTCACAGTGCCGGCATACTTCAACGACGCCCAGAGA 1544035 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGA 195810 ||||| || || ||||||| | || || ||||| | |||| || | || |||| || Sbjct 1544036 CAGGCTACTAAAGACGCTGGCACCATCGCTGGTCTGA-CTGTGCTACGTGTTGTCAACGA 1544094 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA---CAAGGACGAAGATAAAAA 195867 ||| || ||||| || |||| ||||| ||||||||||| |||||| || | | Sbjct 1544095 ACCCACTGCGGCAGCTCTTGCCTATGGCCTGGACAAGAAGGGCAAGGA----GAGCCAGA 1544150 Query 195868 TGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGG 195927 | || | ||| ||||| ||||| ||||| |||||||| || |||||| || |||| Sbjct 1544151 TC-ATCG-TCTACGATCTGGGTGGCGGTACCTTTGATGTGTCGCTTCTCTCAATCGAAGA 1544208 Query 195928 TGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| | |||||||| | |||||| ||||||||||| ||||| |||||||| |||||||| Sbjct 1544209 TGGTGTCTTCGAAGTCATGGCTACCGCTGGTGATACCCATCTTGGTGGTGAGGATTTCGA 1544268 Query 195988 T 195988 | Sbjct 1544269 T 1544269 Score = 113 bits (124), Expect = 6e-20 Identities = 233/343 (68%), Gaps = 14/343 (4%) Strand=Plus/Minus Query 195649 TATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGA 195708 ||||||| || ||||||||||||||||| ||| | | | || || | || || | Sbjct 210290 TATGGTGCTGTCCAAGATGAAGGAGACTGCTGAAGCATATCTCGGCAAGCCCGTTAAGAA 210231 Query 195709 TGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768 || || || || || ||||| ||||||| ||| || ||||| || ||||| ||||| Sbjct 210230 CGCCGTGGTCACCGTCCCTGCCTACTTCAACGATATGCAGCGACAAGCTACAAAAGACGC 210171 Query 195769 TGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 | | ||||| || || | ||| ||| | | |||| ||||| || || || || Sbjct 210170 CGGTCAGATTGCCGG-CTTGAATGTACTTCGGGTCGTCAACGAACCCACCGCAGCCGCGC 210112 Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGT-ATTG--ATCTTTGATC 195884 |||| || |||||||| ||| |||||| | || || | ||| ||| | Sbjct 210111 TTGCCTACGGTCTGGAAAAG---------GAAGATGATCGCGTGATCGCAGTCTATGACC 210061 Query 195885 TCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAA 195944 | ||||| ||||| |||||| ||||| | || | || | ||| | |||||||| | Sbjct 210060 TTGGTGGAGGTACCTTTGATATCTCAGTGCTTGAGATCCAGAAAGGTGTTTTCGAAGTCA 210001 Query 195945 AGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || |||| |||||||| || || ||||| || || ||||| Sbjct 210000 AGTCTACCAACGGTGATACCCACCTGGGTGGCGAGGACTTCGA 209958 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || ||||||||| | |||||||| ||||| || || ||||| ||| |||| || Sbjct 1543529 ATCGGTATCGATCTGGGAACTACATACTCCTGCGTCGGTGTGATGCAGAATGGCAAGGTC 1543588 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 ||||| || || ||||||||||| || | ||| || || ||||| ||||||||||| Sbjct 1543589 GAGATCATTGTCAACGACCAAGGAAATCGGATAACACCTTCATACGTGGCCTTTACAGAC 1543648 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCA 195456 | || || | ||||| || || ||||| ||||| Sbjct 1543649 GAAGAGCGCTTAGTTGGCGACGCAGCAAAGAATCA 1543683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862210864560