Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 8e-14 >seq12 Length=2267901 Score = 93.3 bits (102), Expect = 8e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || || ||||| | || | ||||| || || Sbjct 994309 ATTTGCATACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTG 994250 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | || | | ||| || | ||| ||||||||||| || | | || ||| Sbjct 994249 TAGTCGGAAAGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGA 994190 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || ||||| |||||||| || ||| | || | || || || || Sbjct 994189 TCTGGAGGAATGCCTTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTG 994130 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || ||||| || || || || || || || || || || |||||||| Sbjct 994129 GACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654141349360