Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq12 104 3e-17 >seq12 Length=2267901 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| |||||||| || || || ||| | || || ||| ||| Sbjct 994302 ATGCAAATCTTTGTCAAAACCTTGACTGGCAAGACGATCACACTCGAGGTTGAATCTTCA 994361 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||||| || | || || || ||||| || ||||| || || || ||| Sbjct 994362 GACACAATTGACAACGTCAAGACGAAGATTCAGGATAAGGAGGGCATCCCACCGGACCAA 994421 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||| | || ||||||||||| ||||| | | || | |||||||| || Sbjct 994422 CAACGATTGATCTTCGCTGGTAAGCAGCTTGAAGACGGCCGTACACTCTCAGATTACAAC 994481 Query 156003 AT 156004 || Sbjct 994482 AT 994483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871789586800