Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq12 107 2e-18 >seq12 Length=2267901 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || ||||||||||| ||||| || | | Sbjct 994530 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACTATTACGCTGGAAGTTGAGAGCTCA 994589 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| || || || || ||||| || Sbjct 994590 GACACCATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAG 994649 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||| || || || |||||| | | | | || || || ||| Sbjct 994650 CAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGGACCCTATCCGACTACAAC 994709 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || | ||||||||| || || |||| || || Sbjct 994710 ATCCAGAAGGAGAGCACCTTGCACTTGGTGCTGAGACTGCGAGGTGG 994756 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || ||||| || || ||| Sbjct 994074 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCCAGT 994133 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| ||||| || ||||| || ||||| ||||| Sbjct 994134 GACACCATCGACAACGTCAAGAGCAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAG 994193 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || || || |||||| | | | | || || || ||| Sbjct 994194 CAACGTCTCATCTTTGCCGGAAAGCAACTCGAGGATGGTCGCACCCTTTCCGACTACAAC 994253 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || || ||||| || || || Sbjct 994254 ATCCAGAAAGAATCCACTCTCCA 994276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897470654440