Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 2e-28
seq9 104 2e-17
>seq12
Length=2267901
Score = 140 bits (154), Expect = 2e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
||||| |||| ||| | ||||||||||||||| ||||| ||||| |||||| | || ||
Sbjct 994744 CTCAGCACCAAGTGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGATAGGGTCCGGCCA 994685
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || |||||||| ||||| |||||||||| |||||||| | || | |||||||||
Sbjct 994684 TCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTG 994625
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || ||||||| | || | || | ||| || || | || ||
Sbjct 994624 TCCTGGATCTTGGATTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCCAGCGTAATA 994565
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || |||||||| ||||| ||||||||
Sbjct 994564 GTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| || ||||| ||||| ||||| || ||| |||| ||||
Sbjct 994285 AGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 994226
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||||||||| ||||| || |||||||| ||| | || | || ||||| ||
Sbjct 994225 TCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCT 994166
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| ||| || || | || ||||||
Sbjct 994165 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGATGGTC 994106
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || ||||| |||||
Sbjct 994105 TTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 109 bits (120), Expect = 4e-19
Identities = 155/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||| ||||| ||||| ||||| ||| |||| ||||
Sbjct 994057 AGGACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 993998
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || || || |||||||| || || ||||| || | || | || ||||||||
Sbjct 993997 TCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 993938
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || ||| |||||| |||| || ||
Sbjct 993937 TGGATCTTGCTCTTGAC--AT--TGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGAT 993882
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || ||||||||||| || ||||||||
Sbjct 993881 GGTCTTGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846
>seq9
Length=4529175
Score = 104 bits (114), Expect = 2e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||||| ||| |||||||| ||||| ||||| || || |||| | ||
Sbjct 1601681 CAGGACCAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCGTC 1601740
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| |||||||||||||| || |||||||| | || | ||| ||||||||
Sbjct 1601741 TTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTC 1601800
Score = 93.3 bits (102), Expect = 3e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 34781 GTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCG 34840
|||| | ||||||| || || ||||| || | || |||| || |||||||| ||
Sbjct 3501062 GTGCGCACCTTCTGGATATTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGTTGCTTGCCC 3501003
Query 34841 GCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTG 34900
|||||||||| || |||||||| | || | || |||||||| | || || ||||
Sbjct 3501002 GCGAAGATCAACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTG 3500943
Query 34901 ACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTC 34960
|| | |||| || || ||||| || | ||| |||||||| ||||||||||||
Sbjct 3500942 ACATTGTCGATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 3500883
Query 34961 TTTACAAAG 34969
|| || |||
Sbjct 3500882 TTGACGAAG 3500874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692708704237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |