Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 >seq12 Length=2267901 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| ||||||||||| || | || ||||| || ||||| | ||| ||| ||| Sbjct 994530 ATGCAGATTTTTGTCAAGACCCTGACTGGCAAGACTATTACGCTGGAAGTTGAGAGCTCA 994589 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || ||| ||||| || || || || | || || || Sbjct 994590 -GACACCATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCA 994648 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||||| || | ||| || || || || ||||| | | || | | |||||||| Sbjct 994649 GCAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGCCGGACCCTATCCGACTACAA 994708 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || |||||| || |||||| ||||| ||||| ||||||| || Sbjct 994709 CATCCAGAAGGAGAGCACCTTGCACTTGGTGCTGAGACTGCGAGGTGG 994756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876688189847