Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq12 109 4e-19 >seq12 Length=2267901 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||||||||| || ||||| || || | || ||||||| Sbjct 994289 ACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACC 994230 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| |||||||| || || ||| | || | | ||||||||| || ||||| || || || Sbjct 994229 ATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTT 994170 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | ||||| | || | |||||| || || || ||||| | Sbjct 994169 ATCTTG-AATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGA 994111 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| | ||| || || || || ||||| Sbjct 994110 TGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219092018243