Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 2e-18
>seq12
Length=2267901
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| || ||||| || |||||||| ||||||| |||| || ||||| |||||||||
Sbjct 994042 GTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTACCA 993983
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
|| |||| || || |||||||| ||||| |||||||| ||||| || || ||
Sbjct 993982 GCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTG 993923
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| ||| || || |||| ||| | |||||||| |||| ||
Sbjct 993922 ACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTC 993863
Query 137395 TTTACGAATATTTGCAT 137411
|||||||| || |||||
Sbjct 993862 TTTACGAAAATCTGCAT 993846
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274
|| |||||||| || |||||||| ||| | |||| || |||||||| || ||
Sbjct 994270 GTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCGAGTTGCTTTCCG 994211
Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334
||| |||| |||||||||||||| ||||| |||||||| || || ||| || ||
Sbjct 994210 GCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTGCTCTTG 994151
Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394
| | || | ||||| ||| || || || | ||| | |||||||| |||| ||
Sbjct 994150 ACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTC 994091
Query 137395 TTTACGAATATTTGCATA 137412
|| ||||| |||||||||
Sbjct 994090 TTCACGAAGATTTGCATA 994073
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261
||| | ||| | || ||||| || || ||||||||||| | ||| | ||||||
Sbjct 994511 AACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCCGTCTTC 994452
Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321
|| || |||||||| |||||| ||||| || || || || ||||| || || ||
Sbjct 994451 AAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTTATCCTG 994392
Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381
||| || || | | || | ||||||| | ||| || || | || | ||||||
Sbjct 994391 AATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGATCGTCTT 994332
Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCATA 137412
||| ||||| ||||| || || |||||||||
Sbjct 994331 GCCAGTCAAGGTTTTGACAAAGATTTGCATA 994301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543859543600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |