Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq12 147 4e-30
>seq12
Length=2267901
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | || ||||| ||||||||||| || || || || |
Sbjct 994302 TACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGG 994243
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | ||| || || ||||| ||||| |||||||| || | ||| ||||||||||
Sbjct 994242 AAAGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAG 994183
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||||||||||||| ||||| || || || || || || ||| | | ||
Sbjct 994182 GAATGCCTTCCTTATCTTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCA 994124
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||| || |||||||| |||| ||||| || || || |||||
Sbjct 994123 ACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | ||| | ||||| | |||||||| ||||| ||||| || || ||||| |
Sbjct 994530 TACCACCACGCAATCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTG 994471
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | |||||||| || || || ||||| ||||| | || |||||| || || |
Sbjct 994470 AGAGTGTACGGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTG 994411
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||| |||||||| | || || || ||||| || || || ||| |
Sbjct 994410 GGATGCCCTCCTTATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAA 994351
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || ||||||||||| ||||| || || ||||| || |||||
Sbjct 994350 CCTCGAGTGTGATCGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826910667797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |