Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq10 297 2e-75 seq12 154 1e-32 seq9 129 6e-25 >seq10 Length=3900288 Score = 297 bits (328), Expect = 2e-75 Identities = 1130/1747 (65%), Gaps = 39/1747 (2%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTTA 148110 || ||| |||||| ||||| || || ||||| || ||||||| | || ||| || | Sbjct 3136692 GATTGGGACTGGTCGATGAAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGA 3136633 Query 148111 TCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGC 148170 | || |||||| | |||||||||| | |||||| | | | || ||| | |||| Sbjct 3136632 C--TGATTTCCCAGACAGTCTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGT 3136575 Query 148171 GCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230 ||| || || || | | || | ||| | || ||| | ||| | | ||| | Sbjct 3136574 TCTGAACTGAACCACCATCGGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAA 3136515 Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 | |||| |||||| | | ||| | | || || ||||||||||| || || || || | Sbjct 3136514 GGTCGACCAGGTCCTTCAACAGCCATGGGTTGACGACCTGAAACTCACCAGCCAGGACAC 3136455 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 | || ||| | |||| ||| | || ||||| | ||||||||||| | |||||||| Sbjct 3136454 GGCGGGAATAGATGTTGGAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 3136395 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT- 148409 ||| | || || |||||| || || ||||| |||||||| |||| || ||| Sbjct 3136394 AGGTTGACGCGGTAGGCATGGGAGCAACAAGCAGAGAGTTGCG--AACCCCGTATTTGGC 3136337 Query 148410 -ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTC 148468 || | | |||||| | |||||||||| || || || || || ||||||||||| Sbjct 3136336 AATGTCGGCCTTCAGTGAGTCCCAGTCCCACAGGTCGGAAGGAGTAACATTCCACATGTC 3136277 Query 148469 GTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 ||| || ||| |||| || | ||||| |||||||| | || | || ||| | Sbjct 3136276 GTATTGGAGAGTGCCTTGGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTGCTC 3136217 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | || || ||||| || ||| || ||| |||||| ||||| || || | Sbjct 3136216 CCTTGCAAGCTCGCATGAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGAT 3136157 Query 148589 GTTGA---GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||||| | | ||| ||| | || | |||| |||||| | || || || Sbjct 3136156 GTTGAGTTGTCGAGCCTCCGGAGAG---TCAAAGGGCAGACGCAGGGCAAGGAATGCATC 3136100 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||||| || || || || | ||||| || |||||| ||||| | | | || Sbjct 3136099 AGCAAGACCTTGAACACCAAGACCAATAGGGCGGTGTCGCATGTT-GCTCTTCTTGGCCT 3136041 Query 148706 CTCG-AGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764 || | | ||||||| |||| |||||||||||||| | |||||| |||||| | | Sbjct 3136040 CTGGCACAGGATAGTAGTTGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGG 3135981 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCA---TCTACGATG-CATCGGTT--CA 148818 | | | | || | || || |||| | || || | | || |||| | Sbjct 3135980 TGACCTCGTGGAGGCGGCCGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAA 3135921 Query 148819 CGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCT 148878 || | ||| || |||||||| || || |||||||||||| ||||||| || |||| Sbjct 3135920 GAGCCAGAGAAGCCAGATTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCT 3135861 Query 148879 CGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGC 148938 ||| ||| |||||| || | || |||| |||||| || |||||||| ||||||| Sbjct 3135860 CGGTGCAGAGATTGGAGCTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGC 3135801 Query 148939 ACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AA 148996 | || |||||||| |||||||| || || || || ||| | || | ||| | Sbjct 3135800 AGGCATCCTTGTAGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCAT 3135741 Query 148997 CCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGT 149056 | | ||| | ||| || ||| ||| | || ||||||| |||||| Sbjct 3135740 ACCA--CAGCTTCTGGGCCTTGACTGTCTGACGGCCACGGCCCTCCTTTTCGTATCTCTC 3135683 Query 149057 ATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCA 149116 || ||| || ||| | |||||||| |||| | ||||| || | || ||||| Sbjct 3135682 GTAGAGCTCCTTGAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCA 3135623 Query 149117 CATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAG 149176 | || | ||| | || | | || |||| ||| |||| ||||| ||| | Sbjct 3135622 GAAAAGAGTCCATTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACAT 3135563 Query 149177 CGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTT-GA 149235 ||| || | | ||| || ||| | || || ||| ||| | ||||| | Sbjct 3135562 CGCATAGAACAAGTCACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAA 3135503 Query 149236 GCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC- 149294 | || | || | || |||||||| ||||| | ||| | |||| |||||| ||| Sbjct 3135502 GAACTC-AAAGACATCGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCT 3135444 Query 149295 --TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAA 149352 ||||||||||||||||||| ||| || |||| || ||||| || | ||| || | Sbjct 3135443 TATTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGA 3135384 Query 149353 TGCCACTGGCAGTGCCGTTAG-TAGAGCTA-ATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 |||| | | || || || | | || | || || | ||| || || | ||| Sbjct 3135383 GGCCATTTGAGGTTCCATTGGTTCCTGCAATATAGGA-TCCCG-TTGCACGAATGCAGTG 3135326 Query 149411 CACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTC 149468 | |||| ||| || || || || || ||| ||||| || || ||| ||| || Sbjct 3135325 AGCATTGAGGCCAATACCACCAGCTGT-CTTGGAGATCATGGCACACGTC-TTGAGAGTG 3135268 Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528 |||||| |||||||||||||| ||||||| | || ||||| ||| | | || Sbjct 3135267 TCGTAGATACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGG 3135208 Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588 || |||| || || ||| | || ||| || || || || | |||||| | Sbjct 3135207 GGCTGTGGCGTTCCCGCATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTCTGGGAC 3135148 Query 149589 ATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACG 149648 || | | ||| | ||||| | || || || ||||| |||||||| | || || Sbjct 3135147 ATGAGATTGTATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACA 3135088 Query 149649 CGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCG 149708 ||||| | ||||||||| ||||| || || |||| || || || ||||||| ||| Sbjct 3135087 CGCATGATCATATGCTGTGGTCGTTCGGCGACTTGCTTGCCGATCTTGAGCAGGTATGAT 3135028 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || || | ||||| |||||||||| | ||||| ||||| ||| ||| | | ||||| Sbjct 3135027 TTCTCCAACGTCTTAAAGCCAAAGTATTGGTAGTTGAAGTCCCGGTCGTAGACGATGGCC 3134968 Query 149769 GCGTCGA 149775 | || || Sbjct 3134967 GAGTTGA 3134961 >seq12 Length=2267901 Score = 154 bits (170), Expect = 1e-32 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 |||| ||| ||||||||||| || ||||| |||| || ||| | | | ||||||||||| Sbjct 994048 TGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTG 993990 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || || ||| | ||||| |||||||| || ||||| |||||||||||||| |||||| Sbjct 993989 TTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 993930 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | |||||| ||| ||| || || | |||| ||| ||||| || Sbjct 993929 GCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGT 993870 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||||||||||||||| Sbjct 993869 CAGGGTCTTTACGAAAATCTGCAT 993846 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| | ||| ||| | |||||||| ||||| || Sbjct 994270 GTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCA-TCCTCGAGTTGCTTTCC 994212 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || ||||| || ||||| ||||||||||| || ||||| ||| Sbjct 994211 GGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTGCTCTT 994152 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| ||| ||| || |||| |||| ||| ||||| ||||| || Sbjct 994151 GACGTTGTCGATGGTGTCACTGGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGGGT 994092 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 994091 CTTCACGAAGATTTGCAT 994074 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||| ||| ||||| || ||||| ||| | || | | | ||||| || Sbjct 994735 AAGTGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGATAGGGTCCGGCCA-TCCTCAAG 994677 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || || | |||||||||||| ||||| || |||||||| ||| Sbjct 994676 TTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGAT 994617 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | || | ||||| | | ||| || || | || | || ||||| Sbjct 994616 CTTGGATTTGACGTTGTCGATGGTGTCTGAGCTCTCAACTTCCAGCGTAATAGTCTTGCC 994557 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||||||||| Sbjct 994556 AGTCAGGGTCTTGACAAAAATCTGCAT 994530 >seq9 Length=4529175 Score = 129 bits (142), Expect = 6e-25 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| |||||||| |||| || ||| | | | |||||||| |||||||||||| | || Sbjct 3501053 TTCTGGATATTGTAGTCGCTCAGCGTCCGGCCA-TCCTCGAGTTGCTTGCCCGCGAAGAT 3500995 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 | |||||||||||| || ||||||||||||||||| |||||| |||| | || Sbjct 3500994 CAACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTC 3500935 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||||| || || || |||| ||||| ||| ||||| || || || || ||||| Sbjct 3500934 GATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 3500875 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| || || ||||| || ||||| ||| | |||| ||| ||||| |||||||| Sbjct 1601696 GGTCGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCGTCTTCGAGTTGCTTGCC 1601755 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | || || |||||||||||||||||||| ||||||||||| Sbjct 1601756 GGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTC 1601800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420661016520