Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 105 2e-17 >seq10 Length=3900288 Score = 105 bits (116), Expect = 2e-17 Identities = 175/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 173106 GGCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTG 173165 ||| |||||||||| ||| |||| |||| ||| | || ||| | | ||| | Sbjct 3135799 GGCATCCTTGTAGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATA 3135740 Query 173166 CCAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATA 173225 ||| || | ||||| || || || | | | || || |||||||||||||| || Sbjct 3135739 CCACAGCTTCTGGGCCTTGACTGTCTGACGGCCACGGCCCTCCTTTTCGTATCTCTCGTA 3135680 Query 173226 GAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAA 173285 ||| || | ||| || | ||||| | ||| ||||||| |||||||| | || || || Sbjct 3135679 GAGCTCCTTGAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAA 3135620 Query 173286 GAGACTCCAATTTCC--ATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATC 173343 ||| |||| |||| | ||||||| | || |||||| | ||||| |||||| ||| Sbjct 3135619 AAGAGTCCA--TTCCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATC 3135562 Query 173344 GCGTAGAACAA 173354 || |||||||| Sbjct 3135561 GCATAGAACAA 3135551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820451732183