Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-18 >seq10 Length=3900288 Score = 107 bits (118), Expect = 2e-18 Identities = 238/352 (68%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | ||||| ||||||||||||||||| || || |||||| | Sbjct 1102813 ACGTAGAACTGGGCGAACATGTGACACGGCGGCAGCGCCATCTTGGACAAGTCCGCCACG 1102872 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCG-ATAAC 147224 ||||| || || | | || ||| | ||||||| |||| | || | || | | Sbjct 1102873 TTCCACGCGCTGAGGATGATCCTCCTATCGTAGGGGTTCGTCTTCAACT-TGCGCACGAT 1102931 Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGC 147284 | | | ||| |||||||| |||||| |||| ||| | |||||| ||| || Sbjct 1102932 TTCCTTGATCTGATCCACGCCTTGGCCCGTATAGTCTGTTCGACAGTCCGTGTATTGTGC 1102991 Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC-G 147343 || || || | |||||||||||| ||||| || || |||||||| || | || | | Sbjct 1102992 GCCGAAATGGCGCCACTGGAAGCCATACACGGGGCCTAGGTCGCCTTCCTCGC-GTCCAG 1103050 Query 147344 AGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCT 147403 ||||||| | | ||| || || | ||||||| | ||||||||||| | ||| Sbjct 1103051 TGAAGCCCAACTTGTCGAGGAATTCCCGCGACCCGTTGCCGTCCCAGATGTGGATGCCCG 1103110 Query 147404 TGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 | | ||||| || ||| |||| |||| | ||||||||| ||||| Sbjct 1103111 CGTCAGAGAGTGGTTTGGAGGTCGTGCAGCCTGACACGAACCAGAGGAGCTC 1103162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487832247200