Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10 125 1e-22 seq21 116 5e-20 >seq10 Length=3900288 Score = 125 bits (138), Expect = 1e-22 Identities = 205/293 (70%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 |||||| ||| ||| ||||| ||| || | || || ||||| ||||| || ||||| | Sbjct 3135145 CATGTCCCAGAAGTGCTTCAC-TCATGCATCCCCGACACTCTTCAATGCGGGAACGCCAC 3135203 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || ||| || || ||||| || | |||||||||| || |||||||| |||| Sbjct 3135204 AGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGAAGGAGGACAGCATCGAGGGTATCT 3135263 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 | ||||| |||||| ||| || | ||||||||| | || || || || || | | Sbjct 3135264 ACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACAGCTGGTGGTATTGGCCTCAATG 3135323 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 | ||| | || || |||| |||| | || || ||||| || || || |||| Sbjct 3135324 CTCACTGCATTCGTGCAACGGGATCCTATATTGCAGGAACCAATGGAACCTCAAATGGCC 3135383 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 | | |||||||| || || || || ||||||| ||||||||||||||| || Sbjct 3135384 TCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCGCTACGTCGACCAGGGC 3135436 Score = 91.5 bits (100), Expect = 2e-12 Identities = 105/138 (76%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 262097 TGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGAC 262156 |||| ||||| | | |||||| | ||||| || || ||||||||| |||||||||| Sbjct 3135737 TGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTCCCTACATGCTCTACAAGGAT 3135796 Query 262157 GCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAACCTGT 262214 ||| |||| || ||||||||| ||||| |||| |||| ||| || |||| || | Sbjct 3135797 GCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACCATTCGA-AGCT-CCAATCTCT 3135854 Query 262215 GCACCGAGATCGTCCAGT 262232 |||||||||| ||| ||| Sbjct 3135855 GCACCGAGATTGTCGAGT 3135872 >seq21 Length=3175452 Score = 116 bits (128), Expect = 5e-20 Identities = 210/302 (70%), Gaps = 10/302 (3%) Strand=Plus/Plus Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || | || || ||||| |||||||||||||| |||||||| Sbjct 2034626 ATGGAGAACATCCACTCGGAGATGTATTCACTCCTCATCGACACCTACGTGAAGGACCCC 2034685 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 |||||| |||| || || |||||||| | || | | | || |||||| Sbjct 2034686 AAAGAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAGAAGGCC 2034745 Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| ||| |||||| | |||||||| || || |||||| | || || | Sbjct 2034746 GACTGGGCTCTGAGGTGGATCTCCGACAAGGAG----TCCAC-CTTTGCTCAACGACTGG 2034800 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | || || | ||||||||| ||||| || || || ||| || ||||| |||| Sbjct 2034801 TTGCTTTCGCAGCCGTCGAGGGTATCTTCTTTTCCGGGTCGTTCGCTGCAATCTTCTGGC 2034860 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGAC 1456307 |||||| ||||| ||||| || ||| |||| || ||| | ||| ||| ||| Sbjct 2034861 TCAAGAGCAAGGGCCTGATGCCGGGCCTT-ACCTTTTCAAATGAACTCATCTCTCGTGAC 2034919 Query 1456308 GA 1456309 || Sbjct 2034920 GA 2034921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808981607726