Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 131 2e-25 seq21 95.1 1e-14 seq9 93.3 4e-14 >seq12 Length=2267901 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || |||||||| || || |||||||||||| | Sbjct 994300 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAA 994241 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || ||||| || || || ||||| || | ||| |||||||| || || Sbjct 994240 AGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGA 994181 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || ||||| ||| | ||||| || || || Sbjct 994180 ATGCCTTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACC 994121 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || || || | || || ||||| |||||||| Sbjct 994120 TCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || |||||||| || || || || || ||||||||||||| | |||| | || ||| Sbjct 994054 ACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 993995 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || || || || | ||||||||||| || || |||||||| || || || Sbjct 993994 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 993935 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||| || || || || ||||| ||||| || Sbjct 993934 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 993875 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || |||||||| ||||| Sbjct 993874 CCAGTCAGGGTCTTTACGAAAATCTGCAT 993846 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||||||||||| || |||||||| || | || | ||| || Sbjct 994510 ACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCCGTCTTCA 994451 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || ||||| || || || || || || ||||| || || || ||| Sbjct 994450 AGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTTATCCTGA 994391 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||| || ||||| || ||||| || || || || Sbjct 994390 ATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGATCGTCTTG 994331 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || |||||||| Sbjct 994330 CCAGTCAAGGTTTTGACAAAGATTTGCAT 994302 Score = 82.4 bits (90), Expect = 8e-11 Identities = 161/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 134476 CCGTTGCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGT 134535 ||||| || || |||| |||| || ||| | ||| | ||| ||||| || |||| Sbjct 994767 CCGTTTACTGACCACCTCGCAGTCTCAGCACCAAGTGCAAGGTGCTCTCCTTCTGGATGT 994708 Query 134536 TGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCT 134595 |||||||| | ||| | || || || || ||||| ||||| |||| | ||||| Sbjct 994707 TGTAGTCGGATAGGGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCT 994648 Query 134596 GATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGG 134655 | ||||| || || || || || || || || || |||||| ||| | ||||| | Sbjct 994647 GGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATGGTGTCTG 994588 Query 134656 ACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || ||||| || || || || | || || || ||||| ||||| Sbjct 994587 AGCTCTCAACTTCCAGCGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530 >seq21 Length=3175452 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 21540 CAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAG 21599 |||||| || || || || |||||||| |||||||| | | | |||||||||| || Sbjct 2035117 CAAACGGTCGGCGACAAACTCAATGTACTGACACATAAGCTTGGAGTTCATGCCCAGCAA 2035058 Query 21600 ATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGAT 21656 | |||| || ||||||||||| || |||||||| |||||||| || || || |||| Sbjct 2035057 ACCGACAGGGAGCGCTTCGGTTAAGAACTCCTTTTCGATAGCGACTGCCTCGGTGAT 2035001 >seq9 Length=4529175 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || ||||| || || |||||||| || |||||||||||| | Sbjct 1601667 CCGCCGCGGAGACGCAGGACCAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAA 1601726 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| ||||| || ||||| || || |||| |||||||| ||||| || Sbjct 1601727 AGCGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 1601786 Query 134607 ATGCCTTCTTTTTCTTGAA 134625 || ||||| || ||| ||| Sbjct 1601787 ATCCCTTCCTTGTCTGGAA 1601805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398254697960