Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 2e-25
seq21 95.1 1e-14
seq9 93.3 4e-14
>seq12
Length=2267901
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || |||||||| || || |||||||||||| |
Sbjct 994300 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAA 994241
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || ||||| || || || ||||| || | ||| |||||||| || ||
Sbjct 994240 AGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGGA 994181
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || |||||||| || ||||| ||| | ||||| || || ||
Sbjct 994180 ATGCCTTCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCAACC 994121
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| ||||| || || || | || || ||||| ||||||||
Sbjct 994120 TCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| |||||||| || || || || || ||||||||||||| | |||| | || |||
Sbjct 994054 ACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 993995
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||| || || || || | ||||||||||| || || |||||||| || || ||
Sbjct 993994 AGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGG 993935
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||| || || || || ||||| ||||| ||
Sbjct 993934 ATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 993875
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || |||||||| |||||
Sbjct 993874 CCAGTCAGGGTCTTTACGAAAATCTGCAT 993846
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||||||||||| || |||||||| || | || | ||| ||
Sbjct 994510 ACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCCGTCTTCA 994451
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || || ||||| || || || || || || ||||| || || || |||
Sbjct 994450 AGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTTATCCTGA 994391
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||| || ||||| || ||||| || || || ||
Sbjct 994390 ATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGATCGTCTTG 994331
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || ||||||||
Sbjct 994330 CCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
Score = 82.4 bits (90), Expect = 8e-11
Identities = 161/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 134476 CCGTTGCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGT 134535
||||| || || |||| |||| || ||| | ||| | ||| ||||| || ||||
Sbjct 994767 CCGTTTACTGACCACCTCGCAGTCTCAGCACCAAGTGCAAGGTGCTCTCCTTCTGGATGT 994708
Query 134536 TGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCT 134595
|||||||| | ||| | || || || || ||||| ||||| |||| | |||||
Sbjct 994707 TGTAGTCGGATAGGGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCT 994648
Query 134596 GATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGG 134655
| ||||| || || || || || || || || || |||||| ||| | ||||| |
Sbjct 994647 GGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATGGTGTCTG 994588
Query 134656 ACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || || || || ||||| || || || || | || || || ||||| |||||
Sbjct 994587 AGCTCTCAACTTCCAGCGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530
>seq21
Length=3175452
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 21540 CAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAG 21599
|||||| || || || || |||||||| |||||||| | | | |||||||||| ||
Sbjct 2035117 CAAACGGTCGGCGACAAACTCAATGTACTGACACATAAGCTTGGAGTTCATGCCCAGCAA 2035058
Query 21600 ATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGAT 21656
| |||| || ||||||||||| || |||||||| |||||||| || || || ||||
Sbjct 2035057 ACCGACAGGGAGCGCTTCGGTTAAGAACTCCTTTTCGATAGCGACTGCCTCGGTGAT 2035001
>seq9
Length=4529175
Score = 93.3 bits (102), Expect = 4e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| || ||||| || || |||||||| || |||||||||||| |
Sbjct 1601667 CCGCCGCGGAGACGCAGGACCAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAA 1601726
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| ||||| || ||||| || || |||| |||||||| ||||| ||
Sbjct 1601727 AGCGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 1601786
Query 134607 ATGCCTTCTTTTTCTTGAA 134625
|| ||||| || ||| |||
Sbjct 1601787 ATCCCTTCCTTGTCTGGAA 1601805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398254697960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |