Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10 178 2e-39 >seq10 Length=3900288 Score = 178 bits (196), Expect = 2e-39 Identities = 398/588 (68%), Gaps = 10/588 (2%) Strand=Plus/Minus Query 69653 TTTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCAT 69711 |||| || || || || | ||| ||| | || |||| ||| | | ||| | ||||| Sbjct 3135536 TTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAA-CTCAAAGACATCGGCGTGCCAG 3135478 Query 69712 GGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTG 69771 || || | || || || | | |||||||| ||||| || ||||| || | ||| | | Sbjct 3135477 GGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGACGTAGCGG 3135418 Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831 || |||||||| | || | ||||| ||||| | ||||| || | ||||| ||||| Sbjct 3135417 GCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCATTGGTTCCT 3135358 Query 69832 GAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTGCCA 69889 | |||||| ||| |||| ||||| | | || || | || || || || || Sbjct 3135357 GCAATATAGGATCCCGTTGCACGAATGCAGTGAGCATTGA--GGCCAATACCACCAGCTG 3135300 Query 69890 TTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 | || ||||| | ||||| ||| || | ||||| || |||||||| ||||| || || Sbjct 3135299 TCTTGGAGATCATGGCACA-CGTCTTGAGAGTGTCGTAGATACCCTCGATGCTGTCCTCC 3135241 Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008 |||||| | | || ||| || | || | ||| ||||||||||| || | | Sbjct 3135240 TTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATTGAAGAGT 3135181 Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068 || || ||||| |||||||| || || | || | ||||||||||| || || || Sbjct 3135180 GTCGGGGATGCATGAGTGAAGCACTTCTGGGACATGAGATTGTATGTCTCGATGGCCTTC 3135121 Query 70069 TCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 || ||||| | | | || || || | || |||||||| | ||||||||| |||||||| Sbjct 3135120 TCAATATCGTCGCCG-TGGATGCCGACAGCCACACGCATGATCATATGCTGTGGTCGTTC 3135062 Query 70128 TACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 | || || || || | |||||||||||| |||| || ||||| ||||| || Sbjct 3135061 GGCGACTTGCTTGCCGATCTTGAGCAGGTATGATTTCTCCAACGTCTTAAAGCCAAAGTA 3135002 Query 70188 GTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 | ||| ||||| | ||||| | || | || || |||| ||| Sbjct 3135001 TTGGTAGTTGAAGTCCCGGTCGTAGACGATGGCCGAGTTGAGTTCATC 3134954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908602513720