Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq10 268 1e-66 >seq10 Length=3900288 Score = 268 bits (296), Expect = 1e-66 Identities = 1131/1753 (65%), Gaps = 61/1753 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || ||||| || || | ||||| || | Sbjct 3136791 CGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCA-GCCAGCAAAGTGCATGGATGT 3136733 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGG---TTCATACTTTGACTTTGGTCAAT 110478 || ||| ||| || || |||| | ||| || |||| | ||| ||||| || Sbjct 3136732 GATTTTGCCCATGGTCGG---TTCCTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGAT 3136676 Query 110479 GAAGCGCCCCCGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTAATTTCCCAAACTG 110537 |||| || || | ||||||||| | | || ||| | || | ||||||| || | Sbjct 3136675 GAAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACTGA-TTTCCCAGACAG 3136617 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | || | |||||| ||| | ||||| | | ||| ||||| | ||||| || Sbjct 3136616 TCTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACCACCAT 3136557 Query 110598 CCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 | | || | | |||||| | | |||||||| |||| | ||||| || | Sbjct 3136556 CGGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCA 3136497 Query 110658 CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTG 110717 || |||||| | ||||||||| || ||| | | |||||||| | Sbjct 3136496 ACAGCCATGGGTTGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTTGG 3136437 Query 110718 TTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 110777 || ||||| ||||||||||| || || || | || || | ||| || || || |||| Sbjct 3136436 AAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGCA 3136377 Query 110778 TTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG---ATGCGTTCCTTGAGAA 110834 | || || | | ||| ||| |||| ||| | | ||| ||| |||| || Sbjct 3136376 TGGGAGCAACAAGCAGAGAGTTGCGAAC-CCCGTAT--TTGGCAATGTCGGCCTTCAGTG 3136320 Query 110835 CATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCT 110893 |||||||| | | | || | || |||| ||||||| | || || ||| Sbjct 3136319 AGTCCCAGTCCCACAGGTCGGAAGGAGTAACATTCC-ACATGTCGTATTGGAGAGTGCCT 3136261 Query 110894 TGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 110953 ||||| | || ||||| | |||||||||| ||||| || || | || || Sbjct 3136260 TGGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTG--CT----CCCTTGCA-AG 3136208 Query 110954 CTCGCCTC---CAGGGAT----GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 ||||| | ||| || ||||| || ||||| |||||||| | || | | Sbjct 3136207 CTCGCATGAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTG 3136148 Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTT 111065 || || || ||||| | | || ||| || ||| |||| || ||||||| Sbjct 3136147 TCGAGCCTCCGGAGAGTCAAAGG-GCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTT 3136089 Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGA 111124 ||||||| | ||||||||| | ||||||||| || ||| || ||| || ||| Sbjct 3136088 GAACACCAAGACCAATAGGGCGGTGTCGCATGTTGCTCTTCTTGGCC-TCTGGCACAGGA 3136030 Query 111125 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 111184 || | || |||| |||| ||| | ||| ||| || | | |||| || || Sbjct 3136029 TAGTAGTTGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGG 3135970 Query 111185 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGAT 111244 || | | ||| | || | ||| | |||| | ||||||| || | || Sbjct 3135969 AGGCGGCCGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAA 3135910 Query 111245 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAG 111304 |||| |||||| ||||| ||||||| |||||||||| | ||| || || || | Sbjct 3135909 GCCAGATTGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGA 3135850 Query 111305 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTG 111364 ||||| || ||| || ||||| ||||| ||||| |||||| ||||||| ||||||||| Sbjct 3135849 TTGGAGCTTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTG 3135790 Query 111365 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATC 111423 |||||||||||||| || |||||||| ||||| | | || || || | ||| | | || Sbjct 3135789 TAGAGCATGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTC 3135730 Query 111424 GGCGGCTGGTACAATGGC-GTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCT 111481 | | || | | || | | |||| || |||||| ||||| | |||||| | Sbjct 3135729 TGGGCCTTG---ACTGTCTGACGGCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCC 3135673 Query 111482 TCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGAC 111541 | || || || || | | |||| |||||||| || | | || |||||||||| | Sbjct 3135672 TTGAAGTCGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTC 3135613 Query 111542 CATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599 |||| || ||| ||| || |||| |||||| | ||| ||| |||||| | | | Sbjct 3135612 CATT--CCTGGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGA 3135555 Query 111600 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 111659 | | || | | ||| || || | || ||||| || || | | |||||| | Sbjct 3135554 ACAAGTCACGAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAA 3135495 Query 111660 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAG 111716 || ||| |||||||| ||||| | |||| |||| || ||| ||| | || Sbjct 3135494 AGACATCGGCGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGC 3135435 Query 111717 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 111776 | || | || ||||| || ||| || || || || ||||| ||||| | |||| || Sbjct 3135434 CCTGGTCGACGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTG 3135375 Query 111777 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA-TGTGCAT- 111834 | ||||| || || |||| ||| | || | ||| | || |||| Sbjct 3135374 AGGTTCCATTGGTTCCTGCAATATAGGATCCCGTTGCAC-----GAATGCAGTGAGCATT 3135320 Query 111835 ---CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 |||||||| ||||| ||| ||||| |||||| | | ||||| | ||||| Sbjct 3135319 GAGGCCAATACCACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGAT 3135260 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951 ||| | ||| ||||||||| || |||| | |||||| ||| | ||| || ||| Sbjct 3135259 ACCCTCGATGCTGTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGG 3135200 Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGT 112010 || || ||||||||||| || || | ||| ||| |||| || | |||||||| | Sbjct 3135199 CGTTCCCGCATTGAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC-TGGGACATGAGAT 3135141 Query 112011 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGA 112070 ||||||||| | | | ||||| || || ||||||||||||| || || ||||||| Sbjct 3135140 TGTATGTCTCGATGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGA 3135081 Query 112071 ACATGTACTGTGG 112083 ||| | |||||| Sbjct 3135080 TCATATGCTGTGG 3135068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031819440800