Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10 208 9e-49 seq21 107 2e-18 >seq10 Length=3900288 Score = 208 bits (230), Expect = 9e-49 Identities = 1100/1732 (64%), Gaps = 37/1732 (2%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| || |||||||| ||| ||||||| || | ||||| || | Sbjct 3136791 CGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCAGCAAAGTGCATGGATGTG 3136732 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGG---TTCATACTTTGGGATTGATCGATG 117953 | ||| | ||| || |||| | ||| || |||| | |||||| || |||||| Sbjct 3136731 ATTTTGCCCATGGTCGG---TTCCTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGATG 3136675 Query 117954 AAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGT 118012 ||| || || || |||||||| | | | ||| | || ||||||||| ||||| Sbjct 3136674 AAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACT-GATTTCCCAGACAGT 3136616 Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 | |||| | ||| || ||| | ||||| | ||| || || | || ||||| | Sbjct 3136615 CTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACCACCATC 3136556 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 || || | | |||||| | | ||||||||| |||| | || |||| || Sbjct 3136555 GGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCAA 3136496 Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190 || ||| | |||| || ||||||||| || ||| || | |||||| ||| Sbjct 3136495 CAGCCATGGGT--TGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTTG 3136438 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250 | || |||||||||||||| || ||||| || | || || | || || || || ||| Sbjct 3136437 GAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGC 3136378 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310 ||||| || | || || ||| || | || | || |||| |||| || | | Sbjct 3136377 ATGGGAGCAACAAGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGCCTTCAGTGAG 3136318 Query 118311 TCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 118367 |||||||| | || | || | | |||||| || | ||||| | ||| Sbjct 3136317 TCCCAGTCCCACAGGTCGGAAGGAGT---AACATTCCACATGTCGTATTGGAGAGTGCCT 3136261 Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 118427 ||||| |||| ||||| |||| ||||| | ||| | || || | ||| | Sbjct 3136260 TGGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTGCTCCCTTGCAAGCTCGCAT 3136201 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCCTTGGC 118486 || ||| || ||||| || || || ||||| || | || | ||| | || Sbjct 3136200 GAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGTC-GAGC 3136142 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 118546 ||| || ||||| | || || || ||| |||| || |||||||| ||||| Sbjct 3136141 CTCCGGAGAGTCAAAGGGCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTTGAACACC 3136082 Query 118547 GAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAAAAT 118605 || ||||| ||||| |||| ||| || |||| || ||| ||| ||||| | | Sbjct 3136081 AAGACCAATAGGGCGGTGTCGCATGTTGCTCTTCTTGGC-CTCTGGCACAGGATAGTAGT 3136023 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 | | ||||| | | | || | ||| ||| || || | |||| || || || Sbjct 3136022 TGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGGAGGCGGC 3135963 Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725 || | ||| | || | ||| | |||| | | ||||| || | || ||||||| Sbjct 3135962 CGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAAGCCAGAT 3135903 Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785 | || |||| ||||||| | |||||||| | ||| || ||||| | || || | Sbjct 3135902 TGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAGC 3135843 Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845 | |||||| ||||||||||| || || ||| |||| || ||||||||||| |||| Sbjct 3135842 TTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCA 3135783 Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCT 118904 |||| || || |||||||| || |||| || || || || | ||| | | || | || Sbjct 3135782 TGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCCT 3135723 Query 118905 GGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 118962 | || | || || | | || ||||| | ||||| | |||||| | | || | Sbjct 3135722 TG-ACTGTCTGACG--GCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCTTGAAGT 3135666 Query 118963 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 119022 | || || | || | || ||||| || | || |||||||| |||| ||||| Sbjct 3135665 CGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTCCATTCCT 3135606 Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082 || ||| || |||| |||||| | ||| || |||| | ||| |||| | || | Sbjct 3135605 GGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGTCAC 3135546 Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142 || || ||| || | || || || | | | ||| || || | || ||| | Sbjct 3135545 GAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGACATCGG 3135486 Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 119199 ||||||| || |||| ||| | |||| | ||| || | || |||||| | Sbjct 3135485 CGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGA 3135426 Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259 | || | || ||| || || ||||| ||||| ||||||| |||| || |||| Sbjct 3135425 CGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCAT 3135366 Query 119260 TTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCGTGGATGTGCATACCAATACC 119317 | || || |||| || | || | | || | | || || | |||||||| Sbjct 3135365 TGGTTCCTGCAATATAGGATCCCGTTGCACGAATGCAGTGAGCAT-TG-AGGCCAATACC 3135308 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 || || ||| ||||| || ||| | ||||| || ||||||| || ||||| Sbjct 3135307 ACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCCTCGATGCT 3135248 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437 ||| |||| | |||| | ||||||| || | || ||| || || || || || Sbjct 3135247 GTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATT 3135188 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTGTCGTAGGTCTCCA 119496 |||||| || || | || || |||| || | |||||||| | ||| ||||| | Sbjct 3135187 GAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC-TGGGACATGAGATTGTATGTCTCGA 3135129 Query 119497 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548 | | ||| || || ||||| || |||| | || ||||| | ||| Sbjct 3135128 TGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCAT 3135077 >seq21 Length=3175452 Score = 107 bits (118), Expect = 2e-18 Identities = 203/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||||||||| |||||||||||||| || ||| || || Sbjct 2034942 GCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTCATTTGAAAAGGTAAGGCCC 2034883 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || ||| |||| | |||||| || ||| || || || || |||||||| Sbjct 2034882 GGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAGATA 2034823 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA- 130192 ||||| || ||||| |||| || || | |||||||| ||||| |||| | Sbjct 2034822 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGG---TGGACTCCTTGTCGGAG 2034766 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | |||| ||| ||||| | ||||| || ||| || |||| ||| | ||| || || Sbjct 2034765 ATCCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCG 2034706 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 || || | |||| ||| || || || | ||| | || ||||| |||||| Sbjct 2034705 AACAGGTATGTCTTCTCTTTGGGGTCCTTCACGTAGGTGTCGATGAGGAGTGAATA 2034650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435022199880