Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq10 208 9e-49
seq21 107 2e-18
>seq10
Length=3900288
Score = 208 bits (230), Expect = 9e-49
Identities = 1100/1732 (64%), Gaps = 37/1732 (2%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||||||||| || |||||||| ||| ||||||| || | ||||| || |
Sbjct 3136791 CGGAGGTAGTACATGCCGGTCTTGAGACCCATCTTCCAGCCAGCAAAGTGCATGGATGTG 3136732
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGG---TTCATACTTTGGGATTGATCGATG 117953
| ||| | ||| || |||| | ||| || |||| | |||||| || ||||||
Sbjct 3136731 ATTTTGCCCATGGTCGG---TTCCTTCAAGTGGATGTTCAGAGATTGGGACTGGTCGATG 3136675
Query 117954 AAGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGT 118012
||| || || || |||||||| | | | ||| | || ||||||||| |||||
Sbjct 3136674 AAGGCACCTCGGTCTGCCGCCATTTGGAGGATTGTCCGTTGACT-GATTTCCCAGACAGT 3136616
Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072
| |||| | ||| || ||| | ||||| | ||| || || | || ||||| |
Sbjct 3136615 CTTGTACAACGCCTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAACTGAACCACCATC 3136556
Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132
|| || | | |||||| | | ||||||||| |||| | || |||| ||
Sbjct 3136555 GGCGATAATACGGTTCTTCATGTTGTCTGACCAGAGGCCAAGGTCGACCAGGTCCTTCAA 3136496
Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190
|| ||| | |||| || ||||||||| || ||| || | |||||| |||
Sbjct 3136495 CAGCCATGGGT--TGACGACCTGAAACTCACCAGCCAGGACACGGCGGGAATAGATGTTG 3136438
Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250
| || |||||||||||||| || ||||| || | || || | || || || || |||
Sbjct 3136437 GAAGTATATGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTTGACGCGGTAGGC 3136378
Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310
||||| || | || || ||| || | || | || |||| |||| || | |
Sbjct 3136377 ATGGGAGCAACAAGCAGAGAGTTGCGAACCCCGTATTTGGCAATGTCGGCCTTCAGTGAG 3136318
Query 118311 TCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 118367
|||||||| | || | || | | |||||| || | ||||| | |||
Sbjct 3136317 TCCCAGTCCCACAGGTCGGAAGGAGT---AACATTCCACATGTCGTATTGGAGAGTGCCT 3136261
Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 118427
||||| |||| ||||| |||| ||||| | ||| | || || | ||| |
Sbjct 3136260 TGGGAGACTGGGCTCCCCTCGTATGTTTCATAGGCGCCTTGCTCCCTTGCAAGCTCGCAT 3136201
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA-TTGCCTTGGC 118486
|| ||| || ||||| || || || ||||| || | || | ||| | ||
Sbjct 3136200 GAAGCAGTGAGAGCAGCGTGGTAAATGGTCTCAAAGATCTGGATGTTGAGTTGTC-GAGC 3136142
Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 118546
||| || ||||| | || || || ||| |||| || |||||||| |||||
Sbjct 3136141 CTCCGGAGAGTCAAAGGGCAGACGCAGGGCAAGGAATGCATCAGCAAGACCTTGAACACC 3136082
Query 118547 GAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAAAAT 118605
|| ||||| ||||| |||| ||| || |||| || ||| ||| ||||| | |
Sbjct 3136081 AAGACCAATAGGGCGGTGTCGCATGTTGCTCTTCTTGGC-CTCTGGCACAGGATAGTAGT 3136023
Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665
| | ||||| | | | || | ||| ||| || || | |||| || || ||
Sbjct 3136022 TGATGTCGATGATCTTGTTCAAATTGCGGGTCACCACTTGGGTGACCTCGTGGAGGCGGC 3135963
Query 118666 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 118725
|| | ||| | || | ||| | |||| | | ||||| || | || |||||||
Sbjct 3135962 CGAAGTCATACTCGCCACGGCCTTGGTCGACAAAGGTTGGAAGAGCCAGAGAAGCCAGAT 3135903
Query 118726 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAAC 118785
| || |||| ||||||| | |||||||| | ||| || ||||| | || || |
Sbjct 3135902 TGCAGACAGCAACCTCATCCGGGGCTGTGTACTCGACAATCTCGGTGCAGAGATTGGAGC 3135843
Query 118786 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 118845
| |||||| ||||||||||| || || ||| |||| || ||||||||||| ||||
Sbjct 3135842 TTCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCA 3135783
Query 118846 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCT 118904
|||| || || |||||||| || |||| || || || || | ||| | | || | ||
Sbjct 3135782 TGTAGGGAGTACCCGTCTCAGTCTGGGCCTCAAGGATGGCATACCACAGCTTCTGGGCCT 3135723
Query 118905 GGCACAG--TGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 118962
| || | || || | | || ||||| | ||||| | |||||| | | || |
Sbjct 3135722 TG-ACTGTCTGACG--GCCACGGCCCTCCTTTTCGTATCTCTCGTAGAGCTCCTTGAAGT 3135666
Query 118963 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 119022
| || || | || | || ||||| || | || |||||||| |||| |||||
Sbjct 3135665 CGTCGCCGTACACATCGGCAAGACCTGGAGCTTCATGAGGGCAGAAAAGAGTCCATTCCT 3135606
Query 119023 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 119082
|| ||| || |||| |||||| | ||| || |||| | ||| |||| | || |
Sbjct 3135605 GGTTCTTCTCGACACGCTCCATGAACAAGTCGGGAGTCCACATCGCATAGAACAAGTCAC 3135546
Query 119083 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 119142
|| || ||| || | || || || | | | ||| || || | || ||| |
Sbjct 3135545 GAGCCCGGATTTCCTCCTTGCCGTGGTTCTTTCTTAGGTTCAAGAACTCAAAGACATCGG 3135486
Query 119143 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 119199
||||||| || |||| ||| | |||| | ||| || | || |||||| |
Sbjct 3135485 CGTGCCAGGGCTCCAAGTAGATGGCGAAAGCGCCCGGTCGCTTATTGCCGCCCTGGTCGA 3135426
Query 119200 CATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCAT 119259
| || | || ||| || || ||||| ||||| ||||||| |||| || ||||
Sbjct 3135425 CGTAGCGGGCCGTGTTATTGAACACACGGAGCATGGGAATGAGGCCATTTGAGGTTCCAT 3135366
Query 119260 TTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCGTGGATGTGCATACCAATACC 119317
| || || |||| || | || | | || | | || || | ||||||||
Sbjct 3135365 TGGTTCCTGCAATATAGGATCCCGTTGCACGAATGCAGTGAGCAT-TG-AGGCCAATACC 3135308
Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377
|| || ||| ||||| || ||| | ||||| || ||||||| || |||||
Sbjct 3135307 ACCAGCTGTCTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATACCCTCGATGCT 3135248
Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437
||| |||| | |||| | ||||||| || | || ||| || || || || ||
Sbjct 3135247 GTCCTCCTTCATGTCGATCAAGAAGCAGGAGGATAGCTGGGGCTGTGGCGTTCCCGCATT 3135188
Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTGTCGTAGGTCTCCA 119496
|||||| || || | || || |||| || | |||||||| | ||| ||||| |
Sbjct 3135187 GAAGAGTGTCGGGGATGCATGAGTGAAGCACTTC-TGGGACATGAGATTGTATGTCTCGA 3135129
Query 119497 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 119548
| | ||| || || ||||| || |||| | || ||||| | |||
Sbjct 3135128 TGGCCTTCTCAATATCGTCGCCGTGGATGCCGACAGCCACACGCATGATCAT 3135077
>seq21
Length=3175452
Score = 107 bits (118), Expect = 2e-18
Identities = 203/296 (69%), Gaps = 6/296 (2%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | ||||||||||| |||||||||||||| || ||| || ||
Sbjct 2034942 GCAAAATCGGTGTGCATGCCCTCGTCACGAGAGATGAGTTCATTTGAAAAGGTAAGGCCC 2034883
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||| || ||| |||| | |||||| || ||| || || || || ||||||||
Sbjct 2034882 GGCATCAGGCCCTTGCTCTTGAGCCAGAAGATTGCAGCGAACGACCCGGAAAAGAAGATA 2034823
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA- 130192
||||| || ||||| |||| || || | |||||||| ||||| |||| |
Sbjct 2034822 CCCTCGACGGCTGCGAAAGCAACCAGTCGTTGAGCAAAGG---TGGACTCCTTGTCGGAG 2034766
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| |||| ||| ||||| | ||||| || ||| || |||| ||| | ||| || ||
Sbjct 2034765 ATCCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCGATAGCATCG 2034706
Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308
|| || | |||| ||| || || || | ||| | || ||||| ||||||
Sbjct 2034705 AACAGGTATGTCTTCTCTTTGGGGTCCTTCACGTAGGTGTCGATGAGGAGTGAATA 2034650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435022199880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |