Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10 197 2e-45 seq21 89.7 6e-13 >seq10 Length=3900288 Score = 197 bits (218), Expect = 2e-45 Identities = 1112/1751 (64%), Gaps = 57/1751 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| | ||| ||||||| ||||| |||| || || || || || ||||| | | Sbjct 3135068 CCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGACGATATTGAGAAGGCC 3135127 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| | |||||||| | || |||| ||| ||| | || || ||||| Sbjct 3135128 ATCGAGACATACAATCTCATGTCCCA-GAAGTGCTTCACTCATGCATCCCCGACACTCTT 3135186 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| || || ||| ||||| | ||| |||||| | |||| || |||||||| Sbjct 3135187 CAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGAAGGAGGA 3135246 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | |||||||| | ||||| | | |||||| ||||| ||| ||||| Sbjct 3135247 CAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACAGCTGG 3135306 Query 104461 GGGTATTGG----GATGCACA-TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 |||||||| |||| || | || | | || | ||| |||| || Sbjct 3135307 TGGTATTGGCCTCAATGCTCACTGCA-----TTCGTGCAACGGGATCCTATATTGCAGGA 3135361 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || ||||| ||| |||| | ||||| ||||| || || || || ||| || ||| Sbjct 3135362 ACCAATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCGC 3135421 Query 104576 TATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || || | || | || | ||| ||| || |||| |||| | ||||| ||| Sbjct 3135422 TACGTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCCCTGG 3135481 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| ||| || | |||||| | | | | ||||| || | ||||| ||| Sbjct 3135482 CACGCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAATCCGG 3135541 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 || || | |||| || | |||| ||| || | |||||| || | || ||| || Sbjct 3135542 GCTCGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGAGAAG 3135601 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | | ||| |||| || || || | | || || ||||| |||||| || Sbjct 3135602 AACCAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTACGGC 3135661 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || || | | || ||| | ||||| | || || || | | ||| || Sbjct 3135662 GACGACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGACAGT- 3135720 Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 | || | || | ||||| | || || || || | || || ||||| ||||| || || Sbjct 3135721 CAAGGCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTCCCTA 3135780 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || ||||| ||| ||||| || || ||||| ||||| || Sbjct 3135781 CATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACCATTCG 3135840 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||||||||| || || || | || | |||| | |||||| ||||| || Sbjct 3135841 AAGCTCCAATCTCTGCACCGAGATTGTCGAGTACACAGCCCCGGATGAGGTTGCTGTCTG 3135900 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 105110 || || || || | ||||| || | | ||| || ||| | | | | | ||| | Sbjct 3135901 CAATCTGGCTTCTCTGGCTCTTCCAACCTTTGTCGA-CCAAGGCCGTGGCGAGTATGACT 3135959 Query 105111 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATA 105170 | |||||||| || || || || ||| || | |||| | || || | Sbjct 3135960 TCGGCCGCCTCCACGAGGTCACCCAAGTGGTGACCCGCAATTTGAACAAGATCATCGACA 3136019 Query 105171 GAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 || | || || || ||| | | | | | || ||| ||||||| || |||||| Sbjct 3136020 TCAACTACTATCCTGTGCCAGAGGCCAAGAAGAGC-AACATGCGACACCGCCCTATTGGT 3136078 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGA 105288 || |||||||| ||||| || |||| |||| || | || || | | ||||| || Sbjct 3136079 CTTGGTGTTCAAGGTCTTGCTGATGCATTCCTTGCCCTG-CGTCTGCCCTTTGACTCTCC 3136137 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 || || || |||| | || ||||||||||| || ||||| ||||| || Sbjct 3136138 GGAGGCTCGACAACTCAACATCCAGATCTTTGAGACCATTTACCACGCTGCTCTCACTGC 3136197 Query 105349 GAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 |||| ||| | ||| || | || | |||||||| | ||||| |||| Sbjct 3136198 ---TTCATGCGAGCTTGCAAGGGAGCAAGGCGCCTATGAAACATACGAGGGGAGCCCAGT 3136254 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC--AC---TAC 105460 || ||||| || |||| || |||| |||| || | | |||| || | Sbjct 3136255 CTCCCAAGGCACTCTCCAATACGACATGT-GGAATGTTACTC----CTTCCGACCTGTGG 3136309 Query 105461 GACTGGGAAGCTCTCAAGGAACGCAT---CAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 |||||||| | || |||| ||| ||| | | ||| |||| ||| ||| || Sbjct 3136310 GACTGGGACTCACTGAAGGCCGACATTGCCAA--ATACGGG-GTTCGCAACTCTCTGCTT 3136366 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 105577 | ||||| ||||| || || || ||| | || || | || || || ||||||||||| Sbjct 3136367 GTTGCTCCCATGCCTACCGCGTCAACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAG 3136426 Query 105578 CCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 || || || | ||||||||| | | ||| || || |||||| | | |||||| Sbjct 3136427 CCATATACTTCCAACATCTATTCCCGCCGTGTCCTGGCTGGTGAGTTTCAGGTCGTCAAC 3136486 Query 105638 AAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 ||| || || | ||||| || |||| |||||||| | | |||||| | | Sbjct 3136487 --CCATGGCTGTTGAAGGACCTGGTCGACCTTGGCCTCTGGTCAGACAACATGAAGAACC 3136544 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 || | | |||||||| |||| || || | || || ||| || ||| Sbjct 3136545 GTATTATCGCCGATGGTGGTTCAGTTCAGAACATCCCCAACATCCCTGCTGACATCAAGG 3136604 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGAT 105814 ||||||| || || ||||||||| || | ||| || | | ||||| ||||| Sbjct 3136605 CGTTGTACAAGACTGTCTGGGAAATC-AGTCAACGGACAATCCTCCAAATGGCGGCAGAC 3136663 Query 105815 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTCTTCATGGAAAGTCCAACG 105871 || ||| |||||| || || ||| | |||| | ||| | |||| || || Sbjct 3136664 CGAGGTGCCTTCATCGACCAGTCCCAATCTCTGAACATCCACTTGAAGGAA---CCGACC 3136720 Query 105872 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 105931 ||| ||| || | || |||||| | | ||||||| ||||||||| || || ||| Sbjct 3136721 ATGGGCAAAATCACATCCATGCACTTTGCTGGCTGGAAGATGGGTCTCAAGACCGGCATG 3136780 Query 105932 TATTACCTCCG 105942 || |||||||| Sbjct 3136781 TACTACCTCCG 3136791 >seq21 Length=3175452 Score = 89.7 bits (98), Expect = 6e-13 Identities = 178/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761 ||||||| | || || || || ||| | || | || || || | ||||| || || Sbjct 2034689 GAGAAGACATACCTGTTCGATGCTATCGACACCATCCCCTGCATCCGCAAGAAGGCCGAC 2034748 Query 94762 TGGGCTATGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 |||||| ||| |||| | | |||| |||| |||||||| | ||||| | || Sbjct 2034749 TGGGCTCTGAGGTGGATCTCCGACAAGGAGTCCA---CCTTTGCTCAACGACTGGTTGCT 2034805 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 94878 || || || |||||||||||||| || || || ||| || || | ||||||||| Sbjct 2034806 TTCGCAGCCGTCGAGGGTATCTTCTTTTCCGGGTCGTTCGCTGCAATCTTCTGGCTCAAG 2034865 Query 94879 AAGCGA-GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||| | || || ||||| || || ||| || || || || ||||||||||||||||| Sbjct 2034866 -AGCAAGGGCCTGATGCCGGGCCTTACCTTTTCAAATGAACTCATCTCTCGTGACGAGGG 2034924 Query 94938 ACTCCACCAAGAGTTTGC 94955 | ||| || ||||| Sbjct 2034925 CATGCACACCGATTTTGC 2034942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260632312520