Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq10 221 1e-52
seq15 129 6e-25
>seq10
Length=3900288
Score = 221 bits (244), Expect = 1e-52
Identities = 511/762 (67%), Gaps = 6/762 (1%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239
|| ||| || | ||||||| || || | || |||||||| ||||| || | |
Sbjct 3135068 CCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGACGA-TATTGAGAAGGC 3135126
Query 53240 CGT-GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298
| | ||||| ||| | | ||| ||| |||| ||| || || || | || || || ||
Sbjct 3135127 CATCGAGACATACAATCTCATGTCCCAGAAGTGCTTCACTCATGCATCCCCGACACTCTT 3135186
Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGA 53358
||| || || ||| || || ||| | || ||||||| || | | |||||||| ||
Sbjct 3135187 CAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGAAGGAGGA 3135246
Query 53359 CTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGG 53418
| ||||| || |||||||| || |||||| ||||||| ||||||||| | ||
Sbjct 3135247 CAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACAGCTGG 3135306
Query 53419 TGGTATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCA-ATCAAGGGGACG 53476
|||||| || || | ||||| | | ||||| ||||| | | | || || ||
Sbjct 3135307 TGGTATTGGCCTCAA-TGCTCACTGCATTCGTGC-AACGGGATCCTATATTGCAGGAACC 3135364
Query 53477 AACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTAC 53536
|| || | | |||| || | || |||||||| || ||||| ||||||||||| |||
Sbjct 3135365 AATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCGCTAC 3135424
Query 53537 GTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596
||| ||||||| || ||||| ||| | |||||||||||| | ||||| ||||||
Sbjct 3135425 GTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCCCTGGCAC 3135484
Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656
||||| | | ||||| | | || | ||| || || | || || || ||
Sbjct 3135485 GCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAATCCGGGCT 3135544
Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716
|||||| |||| || |||||| ||| ||| | |||||| | || |||||| ||
Sbjct 3135545 CGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGAGAAGAAC 3135604
Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776
|||| ||| || | ||||| | || || || || | ||| ||||| ||
Sbjct 3135605 CAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTACGGCGAC 3135664
Query 53777 GAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836
|| || || ||| | || || |||| | ||||||| | ||| ||||||
Sbjct 3135665 GACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGACAGTCAAG 3135724
Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896
|| | || | ||| |||| ||||| || |||| |||||||| || || ||||||
Sbjct 3135725 GCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTCCCTACATG 3135784
Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||||| | |||| |||||||||||||||||||
Sbjct 3135785 CTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAAC 3135826
Score = 100 bits (110), Expect = 3e-16
Identities = 297/449 (66%), Gaps = 13/449 (3%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| || || || ||||| |||||||| || | ||||| | ||||||
Sbjct 3136352 CGCAACTCTCTGCTTGTTGCTCCCATGCCTACCGCGTCAACCTCGCAGATTCTTGGCAAC 3136411
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| || ||||| || || |||||||||| ||||| ||| || ||||||
Sbjct 3136412 AACGAATGCTTTGAGCCATATACTTCCAACATCTATTCCCGCCGTGTCCTGGCTGGTGAG 3136471
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
||| | ||||| || | ||||||||| | | | |||
Sbjct 3136472 TTTCAGGTCGTCAACCCATGGCTGTTGAAGGACCTGGTCGACCTTGGCCTCTGGTCAGAC 3136531
Query 55664 CAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCT 55720
| || |||| |||| | || || || || || || ||||| || | |||
Sbjct 3136532 AACATGAAGAACCGTATTATCGCCGAT-GGTGGTTCAGTTCAGAACATCCCCAACATCC- 3136589
Query 55721 CTGC-GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGAT---TCCACAGAAGAGTCTGA 55775
|||| | | |||||| | | ||| ||| || ||||| || || || || | ||
Sbjct 3136590 CTGCTGACATCAAGGCGTTGTACAAGACTGTCTGGGAAATCAGTCAACGGACAATCCTCC 3136649
Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835
| ||| || || || ||||| | ||||||||||||||| |||||||||||| |
Sbjct 3136650 ---AAATGGCGGCAGACCGAGGTGCCTTCATCGACCAGTCCCAATCTCTGAACATCCACT 3136706
Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895
|| || | || | ||| ||| | | || ||||||||| || ||||||| ||| |
Sbjct 3136707 TGAAGGAACCGACCATGGGCAAAATCACATCCATGCACTTTGCTGGCTGGAAGATGGGTC 3136766
Query 55896 TCAAGACGGGTATGTACTATCTGCGGACC 55924
||||||| || |||||||| || || |||
Sbjct 3136767 TCAAGACCGGCATGTACTACCTCCGCACC 3136795
>seq15
Length=1330720
Score = 129 bits (142), Expect = 6e-25
Identities = 291/432 (67%), Gaps = 4/432 (1%)
Strand=Plus/Minus
Query 117141 AGCAGCTGAACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAG 117200
|| |||| | || ||||||||||| || || ||||| | |||||||| || ||||| |
Sbjct 945391 AGGAGCTCCAGCCCGTTCCGATACCGTCCGCGCCATTGACAAGAATCATGGGGACGACCG 945332
Query 117201 GAACGTAGAACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCAT 117260
| | || | ||| || || | || |||| || |||| |||| | | |
Sbjct 945331 GTGCATAAACCTCCGGTTCGATCTTTTTGTCGTCATCGAAATTGTACGTGAGAAGAGGCT 945272
Query 117261 TGTCA-CTCGGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGA 117319
|| || || | || | ||| ||| | |||| |||||| || || |||||||||
Sbjct 945271 CATCCGCTTGG-TGAAAGAGCTTCCTGGCAAAAGGTGATAGGCGCGTAAAGATGTAACGA 945213
Query 117320 GAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAG 117379
| |||||||| || | || || || ||||| ||||| || ||||| |
Sbjct 945212 GCGCTTGCAGAGTCACTTCCTCCCTGGTTTCGAGTACCAAATTGGCCTGATGGCTCAAGA 945153
Query 117380 AGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGG 117439
||||| | |||||| | || || ||| ||||||||||| ||||||||| ||| ||
Sbjct 945152 AGGTTGATGTTGTTCGATCCAACGAAGGTTTGAGCCAAGCCGACAATCGTTTGTTGAAGA 945093
Query 117440 CTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCC-ACGTAGCCCGCCAGCTGAGCCAC 117498
||||| ||||||||||| |||||| ||| || || | || |||| | ||| ||
Sbjct 945092 GAAGCCTCGCCATGGTGATAAGCCGTC-ATTCCACCAACCAAACCTGCCAATTCAGCGAC 945034
Query 117499 CTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGG 117558
||||| || | ||| ||| ||||| ||| || || || ||||| ||||| | ||
Sbjct 945033 TTTCATATCCTTCTTCAAGTTGCGCTTGAAGCATGCGTACATGACCTTCCGCTGGCCGGG 944974
Query 117559 CTTCAGACCATC 117570
||| | ||| ||
Sbjct 944973 CTTTAAACCGTC 944962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215842675400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |