Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 221 1e-52 seq15 129 6e-25 >seq10 Length=3900288 Score = 221 bits (244), Expect = 1e-52 Identities = 511/762 (67%), Gaps = 6/762 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 || ||| || | ||||||| || || | || |||||||| ||||| || | | Sbjct 3135068 CCACAGCATATGATCATGCGTGTGGCTGTCGGCATCCACGGCGACGA-TATTGAGAAGGC 3135126 Query 53240 CGT-GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298 | | ||||| ||| | | ||| ||| |||| ||| || || || | || || || || Sbjct 3135127 CATCGAGACATACAATCTCATGTCCCAGAAGTGCTTCACTCATGCATCCCCGACACTCTT 3135186 Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGA 53358 ||| || || ||| || || ||| | || ||||||| || | | |||||||| || Sbjct 3135187 CAATGCGGGAACGCCACAGCCCCAGCTATCCTCCTGCTTCTTGATCGACATGAAGGAGGA 3135246 Query 53359 CTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGG 53418 | ||||| || |||||||| || |||||| ||||||| ||||||||| | || Sbjct 3135247 CAGCATCGAGGGTATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACAGCTGG 3135306 Query 53419 TGGTATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCA-ATCAAGGGGACG 53476 |||||| || || | ||||| | | ||||| ||||| | | | || || || Sbjct 3135307 TGGTATTGGCCTCAA-TGCTCACTGCATTCGTGC-AACGGGATCCTATATTGCAGGAACC 3135364 Query 53477 AACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTAC 53536 || || | | |||| || | || |||||||| || ||||| ||||||||||| ||| Sbjct 3135365 AATGGAACCTCAAATGGCCTCATTCCCATGCTCCGTGTGTTCAATAACACGGCCCGCTAC 3135424 Query 53537 GTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCAC 53596 ||| ||||||| || ||||| ||| | |||||||||||| | ||||| |||||| Sbjct 3135425 GTCGACCAGGGCGGCAATAAGCGACCGGGCGCTTTCGCCATCTACTTGGAGCCCTGGCAC 3135484 Query 53597 GCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC 53656 ||||| | | ||||| | | || | ||| || || | || || || || Sbjct 3135485 GCCGATGTCTTTGAGTTCTTGAACCTAAGAAAGAACCACGGCAAGGAGGAAATCCGGGCT 3135544 Query 53657 CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGAC 53716 |||||| |||| || |||||| ||| ||| | |||||| | || |||||| || Sbjct 3135545 CGTGACTTGTTCTATGCGATGTGGACTCCCGACTTGTTCATGGAGCGTGTCGAGAAGAAC 3135604 Query 53717 GAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAG 53776 |||| ||| || | ||||| | || || || || | ||| ||||| || Sbjct 3135605 CAGGAATGGACTCTTTTCTGCCCTCATGAAGCTCCAGGTCTTGCCGATGTGTACGGCGAC 3135664 Query 53777 GAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836 || || || ||| | || || |||| | ||||||| | ||| |||||| Sbjct 3135665 GACTTCAAGGAGCTCTACGAGAGATACGAAAAGGAGGGCCGTGGCCGTCAGACAGTCAAG 3135724 Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896 || | || | ||| |||| ||||| || |||| |||||||| || || |||||| Sbjct 3135725 GCCCAGAAGCTGTGGTATGCCATCCTTGAGGCCCAGACTGAGACGGGTACTCCCTACATG 3135784 Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||||| | |||| ||||||||||||||||||| Sbjct 3135785 CTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAAC 3135826 Score = 100 bits (110), Expect = 3e-16 Identities = 297/449 (66%), Gaps = 13/449 (3%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| ||||| || || || ||||| |||||||| || | ||||| | |||||| Sbjct 3136352 CGCAACTCTCTGCTTGTTGCTCCCATGCCTACCGCGTCAACCTCGCAGATTCTTGGCAAC 3136411 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 ||||| || ||||| || || |||||||||| ||||| ||| || |||||| Sbjct 3136412 AACGAATGCTTTGAGCCATATACTTCCAACATCTATTCCCGCCGTGTCCTGGCTGGTGAG 3136471 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 ||| | ||||| || | ||||||||| | | | ||| Sbjct 3136472 TTTCAGGTCGTCAACCCATGGCTGTTGAAGGACCTGGTCGACCTTGGCCTCTGGTCAGAC 3136531 Query 55664 CAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCT 55720 | || |||| |||| | || || || || || || ||||| || | ||| Sbjct 3136532 AACATGAAGAACCGTATTATCGCCGAT-GGTGGTTCAGTTCAGAACATCCCCAACATCC- 3136589 Query 55721 CTGC-GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGAT---TCCACAGAAGAGTCTGA 55775 |||| | | |||||| | | ||| ||| || ||||| || || || || | || Sbjct 3136590 CTGCTGACATCAAGGCGTTGTACAAGACTGTCTGGGAAATCAGTCAACGGACAATCCTCC 3136649 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | ||| || || || ||||| | ||||||||||||||| |||||||||||| | Sbjct 3136650 ---AAATGGCGGCAGACCGAGGTGCCTTCATCGACCAGTCCCAATCTCTGAACATCCACT 3136706 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 || || | || | ||| ||| | | || ||||||||| || ||||||| ||| | Sbjct 3136707 TGAAGGAACCGACCATGGGCAAAATCACATCCATGCACTTTGCTGGCTGGAAGATGGGTC 3136766 Query 55896 TCAAGACGGGTATGTACTATCTGCGGACC 55924 ||||||| || |||||||| || || ||| Sbjct 3136767 TCAAGACCGGCATGTACTACCTCCGCACC 3136795 >seq15 Length=1330720 Score = 129 bits (142), Expect = 6e-25 Identities = 291/432 (67%), Gaps = 4/432 (1%) Strand=Plus/Minus Query 117141 AGCAGCTGAACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAG 117200 || |||| | || ||||||||||| || || ||||| | |||||||| || ||||| | Sbjct 945391 AGGAGCTCCAGCCCGTTCCGATACCGTCCGCGCCATTGACAAGAATCATGGGGACGACCG 945332 Query 117201 GAACGTAGAACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCAT 117260 | | || | ||| || || | || |||| || |||| |||| | | | Sbjct 945331 GTGCATAAACCTCCGGTTCGATCTTTTTGTCGTCATCGAAATTGTACGTGAGAAGAGGCT 945272 Query 117261 TGTCA-CTCGGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGA 117319 || || || | || | ||| ||| | |||| |||||| || || ||||||||| Sbjct 945271 CATCCGCTTGG-TGAAAGAGCTTCCTGGCAAAAGGTGATAGGCGCGTAAAGATGTAACGA 945213 Query 117320 GAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAG 117379 | |||||||| || | || || || ||||| ||||| || ||||| | Sbjct 945212 GCGCTTGCAGAGTCACTTCCTCCCTGGTTTCGAGTACCAAATTGGCCTGATGGCTCAAGA 945153 Query 117380 AGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGG 117439 ||||| | |||||| | || || ||| ||||||||||| ||||||||| ||| || Sbjct 945152 AGGTTGATGTTGTTCGATCCAACGAAGGTTTGAGCCAAGCCGACAATCGTTTGTTGAAGA 945093 Query 117440 CTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCC-ACGTAGCCCGCCAGCTGAGCCAC 117498 ||||| ||||||||||| |||||| ||| || || | || |||| | ||| || Sbjct 945092 GAAGCCTCGCCATGGTGATAAGCCGTC-ATTCCACCAACCAAACCTGCCAATTCAGCGAC 945034 Query 117499 CTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGG 117558 ||||| || | ||| ||| ||||| ||| || || || ||||| ||||| | || Sbjct 945033 TTTCATATCCTTCTTCAAGTTGCGCTTGAAGCATGCGTACATGACCTTCCGCTGGCCGGG 944974 Query 117559 CTTCAGACCATC 117570 ||| | ||| || Sbjct 944973 CTTTAAACCGTC 944962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215842675400