Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 2e-22
>seq12
Length=2267901
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || | || |||||| || | ||||||||||| || ||||| || || ||
Sbjct 994756 CCACCTCGCAGTCTCAGCACCAAGTGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGAT 994697
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || |||||||| || |||||||| || | | ||| ||||| || ||
Sbjct 994696 AGGGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCGGGTGGG 994637
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | ||| ||| | || |||||| |||||| ||
Sbjct 994636 ATACCCTCCTTGTCCTGGATC-TTGGATTTGACGTTGTCGATGGTGTCTGAGCTCTCAAC 994578
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || || || || | || || ||||||||||||||
Sbjct 994577 TTCCAGCGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
||| |||||| ||||| || ||||| |||||||| ||||| || |||||||||| ||
Sbjct 994505 ATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCCGTCTTCAAGCTG 994446
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
||||| || || || || || ||||||||||| || | |||||||| || ||| |
Sbjct 994445 CTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTTATC-CTGAATCT 994387
Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| || || ||| | |||||||||| || || || | || ||||| || || |
Sbjct 994386 TCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGATCGTCTTGCCAG 994327
Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| ||||| || |||||
Sbjct 994326 TCAAGGTTTTGACAAAGATTTGCAT 994302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729511777359
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |