Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12 109 5e-19 >seq12 Length=2267901 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| |||||| | || || || || || ||| | || Sbjct 994302 ATGCAAATCTTTGTCAAAACCTTGACTGGCAAGACGATCACACTCGAGGTTGAATCTTCA 994361 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| || || || ||||| ||||| || ||| Sbjct 994362 GACACAATTGACAACGTCAAGACGAAGATTCAGGATAAGGAGGGCATCCCACCGGACCAA 994421 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| || || || | |||||| | || | || ||||||||| Sbjct 994422 CAACGATTGATCTTCGCTGGTAAGCAGCTTGAAGACGGCCGTACACTCTCAGATTACAAC 994481 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||| | ||| | | ||||| ||||| || Sbjct 994482 ATCCAGAAGGAATCCACTCTGCATCTCGTTCTCAGATTGCGTGGTGGTAT 994531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918274960960