Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016- 08-09] 23 sequences; 29,805,862 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 >seq12 Length=2267901 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || | |||||||| || || || || || |||| || || || | || || Sbjct 994739 CACCAAGTGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGATAGGGTCCGGCCATCCTC 994680 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||| || ||||| ||||| || || | ||||||||||| || | | ||| |||||| Sbjct 994679 AAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTG 994620 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCGTGATAC 39250 ||| || ||||| ||| | | | || || ||| ||| || |||| ||| ||| Sbjct 994619 GATCTTGGATTTGA-CGTTGTCGATGGTGTCTGAGCT---CTCAACTTCCAGCGTAATAG 994564 Query 39251 TTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| || || ||||| || ||||| Sbjct 994563 TCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545479592999