Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 2e-22
seq9 86.0 1e-11
>seq12
Length=2267901
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| |||| || || | ||||| || || || ||||| ||
Sbjct 994721 CTCCTTCTGGATGTTGTAGTCGGATAGGGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAA 994662
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || ||||||||||| | | ||| || ||||| || || || || |||||| |
Sbjct 994661 GATCAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGATTTGACGTT 994602
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | | ||||||| ||||| ||||| || |||||||| ||||| || || ||||| ||
Sbjct 994601 GTCGATGGTGTCTGAGCTCTCAACTTCCAGCGTAATAGTCTTGCCAGTCAGGGTCTTGAC 994542
Query 152093 GAAGACCTGCAT 152104
|| | ||||||
Sbjct 994541 AAAAATCTGCAT 994530
Score = 116 bits (128), Expect = 9e-21
Identities = 162/223 (73%), Gaps = 8/223 (4%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| ||||| ||||| || ||||| ||||||||||| |||| | || |
Sbjct 994292 GAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCG 994233
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
||||| || || ||||| ||||| ||||| || | ||||| || | | || |||
Sbjct 994232 ACCATCCTCGAGTTGCTTT--CCGGCAAAGATGAGACGTTGCTGATCTGGAGGAATGCCT 994175
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAA 152061
||||| |||||||| || ||||| | || | | |||| || |||| || || |
Sbjct 994174 TCCTTATCTTGAATCTTGCTCTTGACGTTGTCGATGGTGTCACTGGACTCA--ACCTCGA 994117
Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || ||||| || || ||||||||||||| |||||
Sbjct 994116 GAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 107 bits (118), Expect = 4e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || |||||||| ||||||||||| ||| | || | |||||
Sbjct 994058 GAGGACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 993999
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || ||| || |||||||| || | |||||| || | | || |||||||| ||
Sbjct 993998 CTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTC 993939
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || |||||| | || | | ||| ||| | ||| || |||||||| ||
Sbjct 993938 CTGGATCTTGCTCTTGACATTGTCGATGGTGTCGCTGGA--CTCGACCTCAAGAGTGATG 993881
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||| ||||| | ||||||
Sbjct 993880 GTCTTGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846
Score = 87.8 bits (96), Expect = 4e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|||||| || ||||| ||||| || || || |||||||||||||| | | || | ||
Sbjct 994517 TCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGTGTACGGCC 994458
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| || || || |||||||| | | || ||||||| | ||| || |||||
Sbjct 994457 GTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGGGATGCCCTCCTT 994398
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|| ||||| || ||||| | || | |||||||| || || || || || ||
Sbjct 994397 ATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAACCTCGAGTGTGAT 994338
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | || || || |||| |||||
Sbjct 994337 CGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
>seq9
Length=4529175
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||| ||||| ||| | || | ||||| || || || || ||||||||
Sbjct 3501053 TTCTGGATATTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGTTGCTTGCCCGCGAAGATC 3500994
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| || ||||||||||| | ||| |||||||| || || || || ||||||| | ||
Sbjct 3500993 AACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 3500934
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || || || || || || || || ||||||||||| ||||| ||||||
Sbjct 3500933 ATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 3500874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820459983433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |