Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20carrionii_20[genbank_20GCA_5F001700775.1_202016-
08-09] 23 sequences; 29,805,862 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq12 172 1e-37
seq9 138 2e-27
seq15 89.7 1e-12
>seq12
Length=2267901
Score = 172 bits (190), Expect = 1e-37
Identities = 177/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || ||||| | ||| |||||| |||||||||||||| |
Sbjct 994301 ACCACCACGGAGACGGAGGACGAGATGGAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 994242
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| ||||| || ||||||||||| | |||||| || || ||
Sbjct 994241 AAGGGTGCGACCATCCTCGAGTTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGAGG 994182
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || ||||| ||||| ||||| ||| || ||| | ||||| ||||| | || |
Sbjct 994181 AATGCCTTCCTTATCTTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCACTGGACTCAA 994123
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||||||||| ||||| || |||| ||||| ||||| || |||||
Sbjct 994122 CCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 994074
Score = 172 bits (190), Expect = 1e-37
Identities = 177/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| | || |||| || || ||||| || || |||||||||||||| |
Sbjct 994757 ACCACCTCGCAGTCTCAGCACCAAGTGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 994698
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| ||||| || ||||||||||||| | || ||||| ||
Sbjct 994697 TAGGGTCCGGCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCGGGTGG 994638
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|||||||||||||| |||||||| | ||| ||| | ||||| ||||| | |||| || |
Sbjct 994637 GATACCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATGGTGTCTG-AGCTCTCAA 994579
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| || || || ||||| || |||| ||||| || || ||||||||
Sbjct 994578 CTTCCAGCGTAATAGTCTTGCCAGTCAGGGTCTTGACAAAAATCTGCAT 994530
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||| | || || ||||| | ||| ||| || ||||||||||| || |
Sbjct 994529 ACCACCACGCAATCTGAGAACGAGATGCAGAGTGGATTCCTTCTGGATGTTGTAATCTGA 994470
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| || || || || || || || |||||||| ||||||||||| ||
Sbjct 994469 GAGTGTACGGCCGTCTTCAAGCTGCTTACCAGCGAAGATCAATCGTTGTTGGTCCGGTGG 994410
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || || ||||| | || ||| | || || ||||| |||| ||| ||
Sbjct 994409 GATGCCCTCCTTATCCTGAATCTTCGTCTTGACGTTGTCAATTGTGTCTGAAGATTCAAC 994350
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || ||||| || || || || || |||||
Sbjct 994349 CTCGAGTGTGATCGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 994302
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || ||||| |||| || ||||| ||||||||||||||
Sbjct 994073 ACCGCCACGAAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCGCT 994014
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || ||||| || || ||||| | || || || ||| ||
Sbjct 994013 CAGGGTGCGGCCATCCTCGAGCTGTTTACCAGCGAAGATGAGGCGCTGCTGATCAGGAGG 993954
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||||| ||||| || || | ||||| ||||| | ||||
Sbjct 993953 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTGACATTGTCGATGGTGTCGCTGGACTCGA 993895
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || |||||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 993894 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTTACGAAAATCTGCAT 993846
>seq9
Length=4529175
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| ||||| |||||||| ||||| ||||||||||| ||||| || || || ||||||
Sbjct 3501053 TTCTGGATATTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGTTGCTTGCCCGCGAAGATC 3500994
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || || ||||| || || || |||||||| |||||||| | ||| || | |||
Sbjct 3500993 AACCGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGGATCTTGGATTTGACATTGTCG 3500934
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | |||||| ||||| ||||| ||||| ||||| | ||||| |||||
Sbjct 3500933 ATCGTGTCGGAGGATTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 3500875
Score = 93.3 bits (102), Expect = 9e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || ||||| || | || ||| || |||||||||||||| |
Sbjct 1601666 ACCGCCGCGGAGACGCAGGACCAGGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 1601725
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||||||| || || ||||| || ||||| ||||||| || || ||||| ||
Sbjct 1601726 AAGCGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 1601785
Query 282992 AATACCCTCCTTGTCT 283007
|| || |||||||||
Sbjct 1601786 GATCCCTTCCTTGTCT 1601801
>seq15
Length=1330720
Score = 89.7 bits (98), Expect = 1e-12
Identities = 246/369 (67%), Gaps = 6/369 (2%)
Strand=Plus/Minus
Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACA- 274489
|||||||| || || |||| || ||| |||||| | || | |||||| ||
Sbjct 944558 ACGATGGGAGTAATGAATTCGACCAAGAATTTTGGAATCTTCAGTAAACTGGGAAATTGT 944499
Query 274490 ACTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGT 274549
||| |||| ||||| || | | ||| |||||| |||||||| || ||| ||
Sbjct 944498 ACT-TGGAGGAAGTTGATCAGCAACCCTTTAATGTGACTTCCGTCATGATCCTGATCGGT 944440
Query 274550 CATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTC-CCTGTTT 274608
||||||||| | ||| || || ||||| | ||||| |||| |||| ||||
Sbjct 944439 CATGATCATCAAATGACCGTAACGAAGACCGTTTGTATCAGTATAGGTCTTCTTGTGTTG 944380
Query 274609 GAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCCACA 274667
|| ||||||||| || ||||| | | | |||||| | ||||| | ||| | ||
Sbjct 944379 GAGGCCCAAGAAATT-CTTGATGTTCTG-GATTTCGGCATTCTTCGAGATCTGATCGACC 944322
Query 274668 GAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGCGC 274727
|||||||| || ||||| || | |||||| || || ||||| || || || || |
Sbjct 944321 GAAGCATCTCGGACGTTGAGTAGCTTACCACGTAGTGGGAAGACACCGAACAAATCTGGG 944262
Query 274728 CCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGAATC 274787
|| | || || | || || ||||| || | ||||| || || || || || |||
Sbjct 944261 CCTACAACGGATCGTCCTGCCATCGCCAGGCCTTTGGCTGAGTCACCTTCAGTCAGGATC 944202
Query 274788 AAAGTACAC 274796
| ||||||
Sbjct 944201 AGTGTACAC 944193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738891539042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |